Assay Detail
Binding
CHEMBL3705673
Review assay metadata, readout intent, target linkage, and publication context from the same page.
Enzymatic Assay: Cyclophilin PPlase activity was measured at 20 C. by using the standard chymotrypsin coupled assay (Kofron J L, Kuzmic P, Kishore V, Colon-Bonilla E, Rich D H. Determination of kinetic constants for peptidyl prolyl cis-trans isomerases by an improved spectrophotometric assay. Biochemistry. 1991 Jun. 25; 30(25):6127-34). The assay buffer (25 mM Hepes, 100 mM NaCl, pH 7.8) and CypA, B or D (1900 nM stock solution) were pre-cooled to 4 C., to which then was added 5 uL of 50 mg/ml chymotrypsin in 1 mM HCl. The reaction was initiated by adding 20 uL of 3.2 mM peptide substrate (Suc-Ala-Ala-cis-Pro-Phe-pNA) in LiCl/TFE solution with rapid inversion. After a delay from the onset of mixing, the absorbance of p-nitroaniline was followed at 390 nM until the reaction was complete (1 min). The final concentration of LiCl in the assay was 20 mM; TFE was present at a concentration of 4% (v/v). Absorbance readings were collected every 1 s by spectrophotometer.
11
Total Activities
11
Compounds Tested
1
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Organism | Homo sapiens |
| Confidence | 9 — Direct single protein target |
| Curated By | Autocuration |
Target
Peptidyl-prolyl cis-trans isomerase B (CHEMBL2075) ↗| Type | SINGLE PROTEIN |
| Organism | Homo sapiens |
Publication
Inhibitors of cyclophilins and uses thereof
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 11 | 5.10 | 6.19 |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL3647433 | — | — | 1 | 6.19 |
| CHEMBL3647432 | — | — | 1 | 6.12 |
| CHEMBL3647430 | — | — | 1 | 5.92 |
| CHEMBL3647438 | — | — | 1 | 5.32 |
| CHEMBL3647429 | — | — | 1 | 5.28 |
| CHEMBL3647424 | — | — | 1 | 5.21 |
| CHEMBL3647426 | — | — | 1 | 4.61 |
| CHEMBL3647427 | — | — | 1 | 4.56 |
| CHEMBL3647437 | — | — | 1 | 4.44 |
| CHEMBL3647428 | — | — | 1 | 4.35 |
| CHEMBL3647425 | — | — | 1 | 4.12 |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL3647433 | — | IC50 | = | 650.0 | nM | 6.19 |
| CHEMBL3647432 | — | IC50 | = | 760.0 | nM | 6.12 |
| CHEMBL3647430 | — | IC50 | = | 1200.0 | nM | 5.92 |
| CHEMBL3647438 | — | IC50 | = | 4800.0 | nM | 5.32 |
| CHEMBL3647429 | — | IC50 | = | 5200.0 | nM | 5.28 |
| CHEMBL3647424 | — | IC50 | = | 6100.0 | nM | 5.21 |
| CHEMBL3647426 | — | IC50 | = | 24600.0 | nM | 4.61 |
| CHEMBL3647427 | — | IC50 | = | 27800.0 | nM | 4.56 |
| CHEMBL3647437 | — | IC50 | = | 36600.0 | nM | 4.44 |
| CHEMBL3647428 | — | IC50 | = | 44500.0 | nM | 4.35 |
| CHEMBL3647425 | — | IC50 | = | 75100.0 | nM | 4.12 |