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Assay Detail

CHEMBL3705682

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Inhibitor Screening Assay: The primary assay for compound inhibitory activity was the LSD1 Inhibitor Screening Assay Kit (Cayman Chemical Company, Ann Arbor, Mich.; Cayman Chemical Item Number 700120). Briefly, test compounds were diluted to 20.times. the desired test concentration in 100% DMSO and 2.5 .mu.L of the diluted drug sample was added to a black 384-well plate. The LSD1 enzyme stock was diluted 17-fold with assay buffer and 40 .mu.M of the diluted LSD1 enzyme was added to the appropriate wells. The reaction mixture comprised horseradish peroxidase, dimethyl K4 peptide (corresponding to the first 21 amino acids of the N-terminal tail of histone H3), and 10-acetyl-3,7-dihydroxyphenoxazine was then added to wells. Generation of resorufin (generated by reacting with H.sub.2O.sub.2 produced in the reaction) was analyzed on an Envision microplate reader with an excitation wavelength of 530 nm and an emission wavelength of 595 nm.
25
Total Activities
25
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Lysine-specific histone demethylase 1A (CHEMBL6136)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Substituted (E)-N′-(1-phenylethylidene)benzohydrazide analogs as histone demethylase inhibitors
(2015)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 25 7.06 7.89

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3104250 1 7.89
CHEMBL3682528 1 7.89
CHEMBL3682530 1 7.89
CHEMBL3682536 1 7.55
CHEMBL3682537 1 7.31
CHEMBL3104249 1 6.89
CHEMBL3104348 1 6.71
CHEMBL199600 1 6.66
CHEMBL3104346 1 6.56
CHEMBL3104347 1 6.54
CHEMBL3104349 1 6.48
CHEMBL3682535 1 6.29
CHEMBL3682534 1 -
CHEMBL3682533 1 -
CHEMBL3682532 1 -
CHEMBL3682531 1 -
CHEMBL3104246 1 -
CHEMBL3682529 1 -
CHEMBL3104251 1 -
CHEMBL3104256 1 -
CHEMBL3104255 1 -
CHEMBL3104254 1 -
CHEMBL3104247 1 -
CHEMBL3682527 1 -
CHEMBL3104351 1 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3104250 IC50 = 13.0 nM 7.89
CHEMBL3682528 IC50 = 13.0 nM 7.89
CHEMBL3682530 IC50 = 13.0 nM 7.89
CHEMBL3682536 IC50 = 28.0 nM 7.55
CHEMBL3682537 IC50 = 49.0 nM 7.31
CHEMBL3104249 IC50 = 128.0 nM 6.89
CHEMBL3104348 IC50 = 196.0 nM 6.71
CHEMBL199600 IC50 = 218.0 nM 6.66
CHEMBL3104346 IC50 = 275.0 nM 6.56
CHEMBL3104347 IC50 = 291.0 nM 6.54
CHEMBL3104349 IC50 = 333.0 nM 6.48
CHEMBL3682535 IC50 = 519.0 nM 6.29
CHEMBL3682534 IC50 > 3000.0 nM -
CHEMBL3682533 IC50 > 3000.0 nM -
CHEMBL3682532 IC50 > 3000.0 nM -
CHEMBL3682531 IC50 > 3000.0 nM -
CHEMBL3104246 IC50 > 3000.0 nM -
CHEMBL3682529 IC50 > 3000.0 nM -
CHEMBL3104251 IC50 > 3000.0 nM -
CHEMBL3104256 IC50 > 3000.0 nM -
CHEMBL3104255 IC50 > 3000.0 nM -
CHEMBL3104254 IC50 > 3000.0 nM -
CHEMBL3104247 IC50 > 3000.0 nM -
CHEMBL3682527 IC50 > 3000.0 nM -
CHEMBL3104351 IC50 > 10000.0 nM -