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Assay Detail

CHEMBL3706053

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Binding
Enzymatic Assay: The cytidine deaminase (CDA) enzymatic assay described by Cacciamani, T. et al., Arch. Biochem. Biophys. 1991, 290, 285-92; Cohen R. et al., J. Biol. Chem., 1971, 246, 7566-8; and Vincenzetti S. et al., Protein Expr. Purif. 1996, 8, 247-53 was used to determine the inhibitory activity (IC50) of compounds described herein. Using this assay, the IC50 of these compounds was determined by following the decrease of substrate (cytidine) caused by the deamination reaction catalyzed by CDA. Disappearance of substrate (cytidine) over time was monitored by the absorbance at 280 nm of the reaction. The assay reaction was carried out in potassium phosphate buffer (pH 7.4, 20 mM, containing 1 mM DTT) in a total volume of 100 ul in a 96-well plate format. The final reaction mixture contained cytidine (50 uM) and purified human recombinant CDA. Purified enzyme was diluted so as to produce an absorbance change of approximately 2 milli-absorbance units/minute.
5
Total Activities
5
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Cytidine deaminase (CHEMBL4502)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Compositions and methods for treating cancer
(2015)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 5 6.64 7.00

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3658871 1 7.00
CHEMBL2311128 TETRAHYDROURIDINE 2.0 1 6.95
CHEMBL3658873 1 6.85
CHEMBL3658870 1 6.62
CHEMBL3658872 1 5.79

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3658871 IC50 = 101.0 nM 7.00
CHEMBL2311128 TETRAHYDROURIDINE IC50 = 113.0 nM 6.95
CHEMBL3658873 IC50 = 140.0 nM 6.85
CHEMBL3658870 IC50 = 237.0 nM 6.62
CHEMBL3658872 IC50 = 1616.0 nM 5.79