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Assay Detail

CHEMBL3706232

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Caliper Mobility-Shift Assay: A sample to be tested is precisely weighed, dissolved by adding DMSO, mixed sufficiently to form 10 mM solution. The above mother solution is diluted with DMSO to 0.5 mM, then diluted in 3.162 gradient multiple to obtain total 11 concentrations.20 ul of substrate 10 uM FL-cGMP was added to 96-well plate, to which was added 1 ul of compound DMSO solution or compound-free DMSO solution, then was added 29 ul of 1.38 ng/ul PDE-5A enzyme buffer solution (100 mM Hepes pH 7.5, 5 mM MgCl2, 0.002% Brij-35). The maximum final concentration of the compound was 10 uM. After incubation at 30 C. for 1 h, 20 ul of 70 uM EDTA was added to terminate reaction. Substrate and products were separated and analyzed by electrophoresis.
18
Total Activities
18
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

cGMP-specific 3',5'-cyclic phosphodiesterase (CHEMBL1827)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Heterocyclic substituted pyrimidine compound
(2015)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 18 9.31 10.55

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3654363 1 10.55
CHEMBL3654365 1 10.12
CHEMBL3654362 1 10.00
CHEMBL3654374 1 9.93
CHEMBL3654361 1 9.76
CHEMBL3654368 1 9.73
CHEMBL3654372 1 9.67
CHEMBL3654367 1 9.32
CHEMBL3654364 1 9.28
CHEMBL3654371 1 9.14
CHEMBL3654366 1 9.13
CHEMBL3654370 1 9.03
CHEMBL3654369 1 8.94
CHEMBL3654376 1 8.84
CHEMBL3654373 1 8.70
CHEMBL3654375 1 8.68
CHEMBL3639532 1 8.40
CHEMBL3654377 1 8.39

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3654363 IC50 = 0.028 nM 10.55
CHEMBL3654365 IC50 = 0.075 nM 10.12
CHEMBL3654362 IC50 = 0.1 nM 10.00
CHEMBL3654374 IC50 = 0.1188 nM 9.93
CHEMBL3654361 IC50 = 0.1721 nM 9.76
CHEMBL3654368 IC50 = 0.1858 nM 9.73
CHEMBL3654372 IC50 = 0.2127 nM 9.67
CHEMBL3654367 IC50 = 0.4765 nM 9.32
CHEMBL3654364 IC50 = 0.5287 nM 9.28
CHEMBL3654371 IC50 = 0.719 nM 9.14
CHEMBL3654366 IC50 = 0.7389 nM 9.13
CHEMBL3654370 IC50 = 0.9353 nM 9.03
CHEMBL3654369 IC50 = 1.14 nM 8.94
CHEMBL3654376 IC50 = 1.44 nM 8.84
CHEMBL3654373 IC50 = 1.976 nM 8.70
CHEMBL3654375 IC50 = 2.077 nM 8.68
CHEMBL3639532 IC50 = 4.013 nM 8.40
CHEMBL3654377 IC50 = 4.079 nM 8.39