Assay Detail
Binding
CHEMBL3887997
Review assay metadata, readout intent, target linkage, and publication context from the same page.
HDAC enzyme inhibitionAssay: HDAC enzyme inhibition assays were performed using purified HDACs 1-10 essentially as described in Beckers et al., 2007, Int. J. Cancer., 121:1138-48 and Perez-Balado et al., 2007, J. Med. Chem., 50:2497-2505. Inhibition assays using nuclear extract were performed essentially as described in Herman et al., 2006, Nat. Chem. Biol., 2:551-558. Briefly, the purified HDACs or nuclear extract were incubated with an acetylated substrate in the absence of the compound to be assayed and with increasing concentrations of the compound. The rate of substrate deacetylation was measured under each condition, and half-maximal inhibitory concentration with regard to each HDAC was determined by standard means.
185
Total Activities
180
Compounds Tested
1
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Organism | Homo sapiens |
| Confidence | 8 — Homologous single protein target |
| Curated By | Autocuration |
Publication
Compositions including 6-aminohexanoic acid derivatives as HDAC inhibitors
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 185 | 6.08 | 8.17 |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL99 | TRICHOSTATIN | 1.0 | 1 | 8.17 |
| CHEMBL3898287 | — | — | 1 | 7.68 |
| CHEMBL3980389 | — | — | 1 | 7.39 |
| CHEMBL3908408 | — | — | 1 | 7.23 |
| CHEMBL3967028 | — | — | 1 | 7.21 |
| CHEMBL3933572 | — | — | 1 | 7.18 |
| CHEMBL3975640 | — | — | 1 | 7.10 |
| CHEMBL3964140 | — | — | 1 | 7.09 |
| CHEMBL3937294 | — | — | 1 | 7.09 |
| CHEMBL3942719 | — | — | 1 | 7.03 |
| CHEMBL3919822 | — | — | 1 | 7.02 |
| CHEMBL3969656 | — | — | 1 | 7.02 |
| CHEMBL3913961 | — | — | 2 | 6.98 |
| CHEMBL3905310 | — | — | 1 | 6.97 |
| CHEMBL3921382 | — | — | 1 | 6.87 |
| CHEMBL3968223 | — | — | 1 | 6.76 |
| CHEMBL3918737 | — | — | 1 | 6.76 |
| CHEMBL3909083 | — | — | 1 | 6.75 |
| CHEMBL3939372 | — | — | 1 | 6.73 |
| CHEMBL3897806 | — | — | 1 | 6.72 |
| CHEMBL3975513 | — | — | 1 | 6.71 |
| CHEMBL3980806 | — | — | 1 | 6.71 |
| CHEMBL3929959 | — | — | 1 | 6.71 |
| CHEMBL3930488 | — | — | 1 | 6.71 |
| CHEMBL3903543 | — | — | 1 | 6.70 |
| CHEMBL3978733 | — | — | 1 | 6.69 |
| CHEMBL3891630 | — | — | 1 | 6.68 |
| CHEMBL3926116 | — | — | 1 | 6.66 |
| CHEMBL3973671 | — | — | 1 | 6.66 |
| CHEMBL3938743 | — | — | 1 | 6.66 |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL99 | TRICHOSTATIN | IC50 | = | 6.7 | nM | 8.17 |
| CHEMBL3898287 | — | IC50 | = | 21.0 | nM | 7.68 |
| CHEMBL3980389 | — | IC50 | = | 41.0 | nM | 7.39 |
| CHEMBL3908408 | — | IC50 | = | 59.0 | nM | 7.23 |
| CHEMBL3967028 | — | IC50 | = | 61.0 | nM | 7.21 |
| CHEMBL3933572 | — | IC50 | = | 66.0 | nM | 7.18 |
| CHEMBL3975640 | — | IC50 | = | 79.0 | nM | 7.10 |
| CHEMBL3937294 | — | IC50 | = | 81.0 | nM | 7.09 |
| CHEMBL3964140 | — | IC50 | = | 81.0 | nM | 7.09 |
| CHEMBL3942719 | — | IC50 | = | 93.0 | nM | 7.03 |
| CHEMBL3969656 | — | IC50 | = | 95.0 | nM | 7.02 |
| CHEMBL3919822 | — | IC50 | = | 95.0 | nM | 7.02 |
| CHEMBL3913961 | — | IC50 | = | 105.0 | nM | 6.98 |
| CHEMBL3905310 | — | IC50 | = | 107.0 | nM | 6.97 |
| CHEMBL3921382 | — | IC50 | = | 135.0 | nM | 6.87 |
| CHEMBL3918737 | — | IC50 | = | 172.0 | nM | 6.76 |
| CHEMBL3968223 | — | IC50 | = | 174.0 | nM | 6.76 |
| CHEMBL3909083 | — | IC50 | = | 177.0 | nM | 6.75 |
| CHEMBL3939372 | — | IC50 | = | 187.0 | nM | 6.73 |
| CHEMBL3897806 | — | IC50 | = | 190.0 | nM | 6.72 |
| CHEMBL3930488 | — | IC50 | = | 193.0 | nM | 6.71 |
| CHEMBL3929959 | — | IC50 | = | 197.0 | nM | 6.71 |
| CHEMBL3980806 | — | IC50 | = | 196.0 | nM | 6.71 |
| CHEMBL3975513 | — | IC50 | = | 195.0 | nM | 6.71 |
| CHEMBL3903543 | — | IC50 | = | 201.0 | nM | 6.70 |
| CHEMBL3978733 | — | IC50 | = | 203.0 | nM | 6.69 |
| CHEMBL3891630 | — | IC50 | = | 207.0 | nM | 6.68 |
| CHEMBL3913961 | — | IC50 | = | 210.0 | nM | 6.68 |
| CHEMBL3938743 | — | IC50 | = | 220.0 | nM | 6.66 |
| CHEMBL3973671 | — | IC50 | = | 218.0 | nM | 6.66 |
| CHEMBL3926116 | — | IC50 | = | 218.0 | nM | 6.66 |
| CHEMBL3960543 | — | IC50 | = | 224.0 | nM | 6.65 |
| CHEMBL3891665 | — | IC50 | = | 234.0 | nM | 6.63 |
| CHEMBL3983762 | — | IC50 | = | 238.0 | nM | 6.62 |
| CHEMBL3910629 | — | IC50 | = | 246.0 | nM | 6.61 |
| CHEMBL3986857 | — | IC50 | = | 248.0 | nM | 6.61 |
| CHEMBL3910879 | — | IC50 | = | 258.0 | nM | 6.59 |
| CHEMBL3985895 | — | IC50 | = | 258.0 | nM | 6.59 |
| CHEMBL3942866 | — | IC50 | = | 254.0 | nM | 6.59 |
| CHEMBL3987199 | — | IC50 | = | 263.0 | nM | 6.58 |
| CHEMBL3973794 | — | IC50 | = | 262.0 | nM | 6.58 |
| CHEMBL3923213 | — | IC50 | = | 264.0 | nM | 6.58 |
| CHEMBL3937638 | — | IC50 | = | 272.0 | nM | 6.57 |
| CHEMBL3946574 | — | IC50 | = | 270.0 | nM | 6.57 |
| CHEMBL3957512 | — | IC50 | = | 278.0 | nM | 6.56 |
| CHEMBL3961745 | — | IC50 | = | 299.0 | nM | 6.52 |
| CHEMBL3973971 | — | IC50 | = | 299.0 | nM | 6.52 |
| CHEMBL3964239 | — | IC50 | = | 300.0 | nM | 6.52 |
| CHEMBL3925220 | — | IC50 | = | 300.0 | nM | 6.52 |
| CHEMBL3932247 | — | IC50 | = | 312.0 | nM | 6.51 |