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Assay Detail

CHEMBL3888909

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Binding
Acid Ceramidase Activity Assay: A hAC protein preparation (10 μg) was preincubated with inhibitors (final DMSO concentration 1%) in assay buffer (100 mM sodium phosphate, 0.1% Nonidet P-40, 150 mM NaCl, 3 mM DTT, 100 mM sodium citrate, pH 4.5) for 30 min at 37° C. Reactions were started by the addition of 50 μM N-lauroyl ceramide (Nu-Chek Prep, Elysian, Minn.) and carried on for 30 min at 37° C. Reactions were stopped by addition of a mixture of chloroform/methanol (2:1, vol/vol) containing 1 nmol 11-lauroleic acid (NuChek Prep). The organic phases were collected, dried under nitrogen and analyzed by UPLC/MS (Acquity, Waters) in the negative-ion mode monitoring the reaction product (lauric acid, m/z=199) using 11-lauroleic acid as internal standard.Lipids were eluted on an Acquity UPLC BEH C18 column (50 mm length, 2.1 mm i.d., 1.7 μm pore size, Waters) column at 0.5 mL-min−1 for 1.5 min with a gradient of acetonitrile (CH3CN) and water, both containing 0.25% acetic acid and 5 mM ammonium acetat
4
Total Activities
4
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

Acid ceramidase (CHEMBL5463)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Acid ceramidase inhibitors and their use as medicaments
(2016)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 4 7.17 7.85

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3900210 1 7.85
CHEMBL2333042 1 7.46
CHEMBL2333040 1 6.81
CHEMBL3957935 1 6.57

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3900210 IC50 = 14.0 nM 7.85
CHEMBL2333042 IC50 = 35.0 nM 7.46
CHEMBL2333040 IC50 = 155.0 nM 6.81
CHEMBL3957935 IC50 = 270.0 nM 6.57