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Assay Detail

CHEMBL4010756

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Binding affinity to HCV 5'-Alexa488-labeled IRES domain 3 loop RNA at 5 degC after overnight incubation by fluorescence assay
14
Total Activities
14
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Hepacivirus hominis
Confidence 3 — Cell-line / Tissue
Curated By Autocuration

Target

Internal ribosome entry site (IRES) (CHEMBL612412)
Type NUCLEIC-ACID
Organism Hepacivirus hominis

Publication

Assessment of new triplet forming artificial nucleobases as RNA ligands directed towards HCV IRES IIId loop.
Safir Filho M, Martin AR, Benhida R.
Bioorg Med Chem Lett (2017) 27 : 1780 -1783
PubMed 28274634 · DOI

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
Kd 14 4.97 5.50

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL4097244 1 5.50
CHEMBL4076836 1 5.29
CHEMBL4299247 1 5.24
CHEMBL4068375 1 5.07
CHEMBL4092747 1 5.03
CHEMBL4104947 1 4.97
CHEMBL4087092 1 4.53
CHEMBL4059720 1 4.09
CHEMBL4093611 1 -
CHEMBL4072913 1 -
CHEMBL4081659 1 -
CHEMBL4071107 1 -
CHEMBL4102668 1 -
CHEMBL4096823 1 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL4097244 Kd = 3200.0 nM 5.50
CHEMBL4076836 Kd = 5100.0 nM 5.29
CHEMBL4299247 Kd = 5700.0 nM 5.24
CHEMBL4068375 Kd = 8600.0 nM 5.07
CHEMBL4092747 Kd = 9400.0 nM 5.03
CHEMBL4104947 Kd = 10800.0 nM 4.97
CHEMBL4087092 Kd = 29500.0 nM 4.53
CHEMBL4059720 Kd = 81500.0 nM 4.09
CHEMBL4093611 Kd = 102500.0 nM -
CHEMBL4072913 Kd = 177000.0 nM -
CHEMBL4081659 Kd = 136900.0 nM -
CHEMBL4071107 Kd - -
CHEMBL4102668 Kd - -
CHEMBL4096823 Kd - -