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Assay Detail

CHEMBL5730898

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Binding
MK-499 Filter Binding Assay: Drug cardiac arrhythmia is an important safety concern for pharmaceutical development and health regulatory authorities. Blockade of heterologously-expressed human ether-a-go-go gene (hERG) channel prolongs the duration of the cardiac action potential leading to a long QT interval that can lead to sudden death (De Ponti, F.; et al Drug Safety 2002, 25, pp. 263-286). It is important to have compounds devoid of hERG channel activity as measured by an in vitro assay. Affinity of compounds for the hERG channel was evaluated in radioligand competition experiments using HEK293 cells that were stably transfected with the hERG channel and radiolabeled ligand, MK-499 a potent antiarrhythmic. This assay correlates well with QT prolongation in vivo (Jamieson, C.; et al., J. Med. Chem. 2006, 49, pp. 5029-5046). 25 μL Target membranes (in assay buffer: 10 mM HEPES/NaOH, pH 7.4, 70 mM NaCl, 60 mM KCl, 2 mM MgCl2, 1 mM CaCl2) purified from a HEK293 cell line expressing the human Ether-á-go-go Related Gene (hERG) ion channel, 1 μL test compound in 10 mM DMSO and 25 μL (6,000 cpm/well; in assay buffer) [35S]MK-0499 radioligand (Merck/Perkin Elmer) were added to the assay plate (Axygen; 384 Deep well ¿Diamond Plate¿, clear). After incubation of the binding reaction at room temperature (RT) for 90 min 50 μL of the assay were transferred to a Multiscreen HTS 384 FC filter plate (Millipore), which had been pre-wetted with 20 μL 0.01% PEI/0.01% Triton X-100 for at least 30 min at RT. Then, 30 μL wash buffer (10 mM HEPES/NaOH, pH 7.4, 130 mM NaCl, 2 mM MgCl2, 1 mM CaCl2) equilibrated to RT were added to each well of the assay plate and subsequently transferred to the filter plate. The assay mixture was aspirated through the filter plate using a Biotek ELx405¿ washer. The filter plate was washed twice with 100 μl cold wash buffer per wash and well and then dried in a drying oven for at least 75 min at 55° C. Afterwards, the bottom of each filter plate was heat sealed with a solid foil seal, then 10 μL of Microscint¿ 0 (Perkin Elmer) were added to each well of the filter plate and finally, the top of each filter plate was sealed with a clear seal. The plates were stored for at least 20 min in a MicroBeta2 reader (Perkin Elmer) before they are counted (60 sec/well).
63
Total Activities
19
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Publication

Preparation and use of 7a-amide substituted- 6,6-difluoro bicyclic himbacine derivatives as PAR-1 receptor antagonists
(2017)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 21 4.56 5.52
kon 21 - -
k_off 21 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5768755 3 5.52
CHEMBL6037827 3 4.92
CHEMBL5923194 3 4.89
CHEMBL6042341 3 4.84
CHEMBL5758218 3 4.81
CHEMBL5895211 3 4.79
CHEMBL5741564 3 4.69
CHEMBL5885431 3 4.66
CHEMBL6056805 3 4.63
CHEMBL6055830 3 4.59
CHEMBL5945844 9 4.58
CHEMBL5847114 3 4.36
CHEMBL5934102 3 4.33
CHEMBL5905690 3 4.32
CHEMBL5909304 3 4.22
CHEMBL5792578 3 4.22
CHEMBL5949816 3 4.22
CHEMBL5768285 3 4.22
CHEMBL5905066 3 4.22

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5768755 IC50 = 3000.0 nM 5.52
CHEMBL6037827 IC50 = 12000.0 nM 4.92
CHEMBL5923194 IC50 = 13000.0 nM 4.89
CHEMBL6042341 IC50 = 14400.0 nM 4.84
CHEMBL5758218 IC50 = 15400.0 nM 4.81
CHEMBL5895211 IC50 = 16300.0 nM 4.79
CHEMBL5741564 IC50 = 20400.0 nM 4.69
CHEMBL5885431 IC50 = 21900.0 nM 4.66
CHEMBL6056805 IC50 = 23400.0 nM 4.63
CHEMBL6055830 IC50 = 25900.0 nM 4.59
CHEMBL5945844 IC50 = 26300.0 nM 4.58
CHEMBL5945844 IC50 = 39100.0 nM 4.41
CHEMBL5847114 IC50 = 43900.0 nM 4.36
CHEMBL5934102 IC50 = 46800.0 nM 4.33
CHEMBL5905690 IC50 = 47700.0 nM 4.32
CHEMBL5792578 IC50 = 60000.0 nM 4.22
CHEMBL5945844 IC50 = 59700.0 nM 4.22
CHEMBL5909304 IC50 = 60000.0 nM 4.22
CHEMBL5768285 IC50 = 60000.0 nM 4.22
CHEMBL5949816 IC50 = 60000.0 nM 4.22
CHEMBL5905066 IC50 = 60000.0 nM 4.22
CHEMBL6037827 k_off = - s-1 -
CHEMBL6056805 kon = - -
CHEMBL6056805 k_off = - s-1 -
CHEMBL5945844 kon = - -
CHEMBL5847114 kon = - -
CHEMBL5847114 k_off = - s-1 -
CHEMBL5923194 kon = - -
CHEMBL5923194 k_off = - s-1 -
CHEMBL6037827 kon = - -
CHEMBL5949816 kon = - -
CHEMBL5949816 k_off = - s-1 -
CHEMBL5792578 kon = - -
CHEMBL5792578 k_off = - s-1 -
CHEMBL5741564 kon = - -
CHEMBL5905066 k_off = - s-1 -
CHEMBL5905066 kon = - -
CHEMBL5905690 k_off = - s-1 -
CHEMBL5905690 kon = - -
CHEMBL5934102 k_off = - s-1 -
CHEMBL5934102 kon = - -
CHEMBL5909304 kon = - -
CHEMBL5885431 kon = - -
CHEMBL6055830 k_off = - s-1 -
CHEMBL6055830 kon = - -
CHEMBL5885431 k_off = - s-1 -
CHEMBL6042341 kon = - -
CHEMBL6042341 k_off = - s-1 -
CHEMBL5768285 k_off = - s-1 -
CHEMBL5768285 kon = - -