Assay Detail
Binding
CHEMBL5731324
Review assay metadata, readout intent, target linkage, and publication context from the same page.
Inhibition of Human SHMT: For the SHMT1 and SHMT2 in vitro enzymatic assays, the rate of 5,10-methylene tetrahydrofolate formation catalyzed by SHMT1/2 was indirectly evaluated by coupling with excess MTHFD2, which converts NAD+ to NADH allowing for reaction monitoring by absorption at 340 nm. The reaction was started by addition of serine (1 mM final) to either human SHMT1 or human SHMT2 (2 mcg/mL), and human MTHFD2 (25 mcg/mL) in a buffer of 50 mM potassium phosphate (pH 7.4), 0.3 mM tetrahydrofolate, 7.5 mM dithiothreitol, 1.25 mM NAD+, and 4% DMSO. Inhibition of initial reaction velocity was determined by adding various inhibitors at different concentrations and monitored as described. IC50 may be calculated based on this assay. For the MTHFD2 in vitro assay, the rate of NADH formation is directly monitored at 340 nm. The reaction is started by addition of 0.125 uM (final) of 5,10 methylene tetrahydrofolate to MTHFD2 (2.5 mcg/mL), 50 mM potassium phosphate (pH 7.4), 7.5 mM dithiothreitol, 1.25 mM NAD+, and 4% DMSO.
54
Total Activities
16
Compounds Tested
3
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Organism | Homo sapiens |
| Confidence | 9 — Direct single protein target |
| Curated By | Autocuration |
Target
Serine hydroxymethyltransferase, cytosolic (CHEMBL1772927) ↗| Type | SINGLE PROTEIN |
| Organism | Homo sapiens |
Publication
SHMT inhibitors
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 18 | 7.99 | 9.40 |
| kon | 18 | - | - |
| k_off | 18 | - | - |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL5747977 | — | — | 3 | 9.40 |
| CHEMBL6041327 | — | — | 3 | 8.77 |
| CHEMBL5860275 | — | — | 3 | 8.70 |
| CHEMBL5952857 | — | — | 3 | 8.62 |
| CHEMBL6026678 | — | — | 3 | 8.40 |
| CHEMBL5852298 | — | — | 9 | 8.30 |
| CHEMBL6065909 | — | — | 3 | 8.30 |
| CHEMBL5843823 | — | — | 3 | 8.10 |
| CHEMBL4083734 | — | — | 3 | 7.89 |
| CHEMBL5743786 | — | — | 3 | 7.77 |
| CHEMBL5903310 | — | — | 3 | 7.77 |
| CHEMBL6001953 | — | — | 3 | 7.70 |
| CHEMBL5741507 | — | — | 3 | 7.17 |
| CHEMBL5955032 | — | — | 3 | 6.69 |
| CHEMBL4083506 | — | — | 3 | 6.23 |
| CHEMBL6028893 | — | — | 3 | - |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL5747977 | — | IC50 | = | 0.4 | nM | 9.40 |
| CHEMBL6041327 | — | IC50 | = | 1.7 | nM | 8.77 |
| CHEMBL5860275 | — | IC50 | = | 2.0 | nM | 8.70 |
| CHEMBL5952857 | — | IC50 | = | 2.4 | nM | 8.62 |
| CHEMBL6026678 | — | IC50 | = | 4.0 | nM | 8.40 |
| CHEMBL5852298 | — | IC50 | = | 5.0 | nM | 8.30 |
| CHEMBL5852298 | — | IC50 | = | 5.0 | nM | 8.30 |
| CHEMBL6065909 | — | IC50 | = | 5.0 | nM | 8.30 |
| CHEMBL5843823 | — | IC50 | = | 8.0 | nM | 8.10 |
| CHEMBL4083734 | — | IC50 | = | 13.0 | nM | 7.89 |
| CHEMBL5903310 | — | IC50 | = | 16.9 | nM | 7.77 |
| CHEMBL5743786 | — | IC50 | = | 17.0 | nM | 7.77 |
| CHEMBL6001953 | — | IC50 | = | 20.0 | nM | 7.70 |
| CHEMBL5852298 | — | IC50 | = | 21.0 | nM | 7.68 |
| CHEMBL5741507 | — | IC50 | = | 67.0 | nM | 7.17 |
| CHEMBL5955032 | — | IC50 | = | 206.0 | nM | 6.69 |
| CHEMBL4083506 | — | IC50 | = | 593.0 | nM | 6.23 |
| CHEMBL6028893 | — | k_off | = | - | s-1 | - |
| CHEMBL6028893 | — | kon | = | - | — | - |
| CHEMBL6028893 | — | IC50 | > | 5000.0 | nM | - |
| CHEMBL5743786 | — | k_off | = | - | s-1 | - |
| CHEMBL5743786 | — | kon | = | - | — | - |
| CHEMBL5843823 | — | k_off | = | - | s-1 | - |
| CHEMBL5741507 | — | kon | = | - | — | - |
| CHEMBL5860275 | — | k_off | = | - | s-1 | - |
| CHEMBL5860275 | — | kon | = | - | — | - |
| CHEMBL6026678 | — | k_off | = | - | s-1 | - |
| CHEMBL6026678 | — | kon | = | - | — | - |
| CHEMBL5952857 | — | k_off | = | - | s-1 | - |
| CHEMBL5952857 | — | kon | = | - | — | - |
| CHEMBL5747977 | — | k_off | = | - | s-1 | - |
| CHEMBL5747977 | — | kon | = | - | — | - |
| CHEMBL6041327 | — | k_off | = | - | s-1 | - |
| CHEMBL5852298 | — | kon | = | - | — | - |
| CHEMBL6001953 | — | kon | = | - | — | - |
| CHEMBL6001953 | — | k_off | = | - | s-1 | - |
| CHEMBL5903310 | — | k_off | = | - | s-1 | - |
| CHEMBL5852298 | — | kon | = | - | — | - |
| CHEMBL5741507 | — | k_off | = | - | s-1 | - |
| CHEMBL5852298 | — | k_off | = | - | s-1 | - |
| CHEMBL5852298 | — | kon | = | - | — | - |
| CHEMBL5852298 | — | k_off | = | - | s-1 | - |
| CHEMBL6041327 | — | kon | = | - | — | - |
| CHEMBL5852298 | — | k_off | = | - | s-1 | - |
| CHEMBL4083734 | — | kon | = | - | — | - |
| CHEMBL4083734 | — | k_off | = | - | s-1 | - |
| CHEMBL6065909 | — | kon | = | - | — | - |
| CHEMBL6065909 | — | k_off | = | - | s-1 | - |
| CHEMBL5903310 | — | kon | = | - | — | - |
| CHEMBL5843823 | — | kon | = | - | — | - |