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Assay Detail

CHEMBL5731334

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Binding
Assay for Determination of Ki Values for Inhibition of GCase Activity: Various concentrations of test compounds were prepared in DMSO and then diluted into buffer consisting of 50 mM sodium phosphate 0.25% w/v sodium taurodexoycholate, pH 7.0. GCase enzyme (Cerezyme®, recombinant human GCase obtained from R&D Systems) was diluted in the same buffer to 0.143 nM. The reaction solution consisted of 25 μL of 6 mM 4-methylumbelliferone-β-D glucopyranoside in 10% DMSO in the same buffer, 12.5 μL of enzyme and 12.5 μL of various concentrations of test compound diluted in buffer. The final concentrations in the reaction were 0.036 nM GCase, 3 mM 4-methylumbelliferone-β-D glucopyranoside, and various concentrations of inhibitor. The reaction was initiated by addition of enzyme and allowed to proceed for 20 min at 37° C. to assess GCase activity. Reactions were stopped by the addition of an equal volume (50 μL) of 0.5 M NaOH, 0.3 M glycine, pH 10.5. Fluorescence was measured on a Biotek Synergy H4 plate reader using a setting of 10 measurements per data point at wavelengths of 365 nm for excitation and 450 nm for emission. Incubations without added enzyme or added inhibitors were used to define no enzyme activity and maximal enzyme activity, respectively. IC50 values were determined by fitting the data to a log[inhibitor concentration] versus response curve using GraphPad Prism. IC50 values were calculated as the concentration of inhibitor required to inhibit GCase activity by 50%. Ki values were determined from the IC50 values by employing the Cheng-Prusoff equation using a GCase Km of 7.9 mM for 4-methylumbelliferone-β-D glucopyranoside at pH 7.0. The compounds of the invention tested exhibit Ki values for inhibition of GCase in the range 0.1 nM-50 μM.
123
Total Activities
31
Compounds Tested
4
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Lysosomal acid glucosylceramidase (CHEMBL2179)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Glucocerebrosidase modulators and uses thereof
(2018)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
kon 41 - -
k_off 41 - -
IC50 30 7.71 8.62
Ki 11 8.01 8.77

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL206468 AFEGOSTAT 2.0 6 8.77
CHEMBL6059819 6 8.68
CHEMBL6060394 3 8.62
CHEMBL5972882 3 8.60
CHEMBL5764654 6 8.59
CHEMBL5817053 3 8.20
CHEMBL5865000 6 8.19
CHEMBL5759325 6 8.17
CHEMBL5912694 3 8.17
CHEMBL5995977 6 8.17
CHEMBL5953736 6 8.15
CHEMBL5801797 3 8.13
CHEMBL6033762 3 8.12
CHEMBL5920792 6 8.10
CHEMBL5824025 3 7.96
CHEMBL5824507 6 7.82
CHEMBL5811481 3 7.82
CHEMBL5759262 3 7.77
CHEMBL5871835 6 7.77
CHEMBL5751832 3 7.70
CHEMBL5877363 3 7.57
CHEMBL5952284 3 7.50
CHEMBL5834114 3 7.44
CHEMBL5992052 3 7.25
CHEMBL5927194 3 7.12
CHEMBL6017695 3 7.12
CHEMBL5804544 3 6.65
CHEMBL6059516 3 6.58
CHEMBL5745201 3 6.33
CHEMBL5998934 3 6.29

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL206468 AFEGOSTAT Ki = 1.7 nM 8.77
CHEMBL6059819 Ki = 2.1 nM 8.68
CHEMBL6060394 IC50 = 2.4 nM 8.62
CHEMBL5972882 IC50 = 2.5 nM 8.60
CHEMBL5764654 Ki = 2.6 nM 8.59
CHEMBL5764654 IC50 = 3.7 nM 8.43
CHEMBL6059819 IC50 = 6.2 nM 8.21
CHEMBL5817053 IC50 = 6.3 nM 8.20
CHEMBL5865000 IC50 = 6.5 nM 8.19
CHEMBL5759325 IC50 = 6.8 nM 8.17
CHEMBL5995977 Ki = 6.7 nM 8.17
CHEMBL5912694 IC50 = 6.7 nM 8.17
CHEMBL5953736 Ki = 7.0 nM 8.15
CHEMBL5801797 IC50 = 7.4 nM 8.13
CHEMBL5759325 Ki = 7.6 nM 8.12
CHEMBL6033762 IC50 = 7.5 nM 8.12
CHEMBL5920792 Ki = 7.9 nM 8.10
CHEMBL5865000 Ki = 8.0 nM 8.10
CHEMBL206468 AFEGOSTAT IC50 = 8.2 nM 8.09
CHEMBL5995977 IC50 = 9.7 nM 8.01
CHEMBL5824025 IC50 = 11.0 nM 7.96
CHEMBL5953736 IC50 = 13.0 nM 7.89
CHEMBL5920792 IC50 = 13.0 nM 7.89
CHEMBL5824507 Ki = 15.0 nM 7.82
CHEMBL5811481 IC50 = 15.0 nM 7.82
CHEMBL5824507 IC50 = 16.0 nM 7.80
CHEMBL5759262 IC50 = 17.0 nM 7.77
CHEMBL5871835 Ki = 17.0 nM 7.77
CHEMBL5751832 IC50 = 20.0 nM 7.70
CHEMBL5871835 IC50 = 22.0 nM 7.66
CHEMBL5877363 IC50 = 27.0 nM 7.57
CHEMBL5952284 IC50 = 32.0 nM 7.50
CHEMBL5834114 IC50 = 36.0 nM 7.44
CHEMBL5992052 IC50 = 56.0 nM 7.25
CHEMBL6017695 IC50 = 75.0 nM 7.12
CHEMBL5927194 IC50 = 75.0 nM 7.12
CHEMBL5804544 IC50 = 222.0 nM 6.65
CHEMBL6059516 IC50 = 264.0 nM 6.58
CHEMBL5745201 IC50 = 462.0 nM 6.33
CHEMBL5998934 IC50 = 507.0 nM 6.29
CHEMBL5799586 Ki = 1400.0 nM 5.85
CHEMBL5751832 kon = - -
CHEMBL6060394 k_off = - s-1 -
CHEMBL5834114 kon = - -
CHEMBL5920792 kon = - -
CHEMBL5920792 k_off = - s-1 -
CHEMBL5927194 k_off = - s-1 -
CHEMBL5927194 kon = - -
CHEMBL5834114 k_off = - s-1 -
CHEMBL5751832 k_off = - s-1 -