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Assay Detail

CHEMBL5731388

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Cell Surface Biotinylation Assay: Huh7.5.1 cells from four 150 mm plates were treated with DMSO, Roc-A (20 nM), or infected by HCVcc. 48 h post-transfection, cells were washed three times with ice-cold PBS and resuspended in PBS at a density of 25×106 cells/ml. Freshly prepared Sulfo-NHS-SS-biotin (Pierce) was added to the cells (final concentration 0.5 μg/ml) and allowed to incubate at 4° C. for 30 min. Cells were then washed three times with ice-cold PBS. 25 mM Tris (pH 8.0) was added in the initial wash to quench any non-reacted biotin reagent. Following cell lysis in RIPA buffer (50 mM Tris-HCl [pH 7.5], 150 mM NaCl, 1% NP-40, 0.25% sodium deoxycholate, 1 mM EDTA, 2 mM Na3VO4 and Pierce protease inhibitor cocktail), lysates were cleared by centrifugation at 13,000×g for 15 min at 4° C. The cleared lysates were used for immunoprecipitation using a 1:1 mixture of Streptavidin beads (Pierce). Beads were washed three times with RIPA buffer, and bound proteins were eluted by boiling the samples in SDS-PAGE sample buffer and then resolved on 9% SDS-PAGE. Biotinylated proteins were detected by anti-PHB1 and anti-PHB2 antibodies.
15
Total Activities
4
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 0 — Uncurated / Unknown
Curated By Autocuration

Target

Unchecked (CHEMBL612545)
Type UNCHECKED

Publication

Aglaroxin C and derivatives as HCV entry inhibitors
(2018)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
EC50 5 6.70 8.40
kon 5 - -
k_off 5 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL438139 ROCAGLAMIDE 3 8.40
CHEMBL466993 6 7.00
CHEMBL5834204 3 4.70
CHEMBL5747434 3 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL438139 ROCAGLAMIDE EC50 = 4.0 nM 8.40
CHEMBL466993 EC50 = 100.0 nM 7.00
CHEMBL466993 EC50 = 200.0 nM 6.70
CHEMBL5834204 EC50 = 20000.0 nM 4.70
CHEMBL5747434 EC50 > 200000000.0 nM -
CHEMBL5747434 kon = - -
CHEMBL5747434 k_off = - s-1 -
CHEMBL438139 ROCAGLAMIDE kon = - -
CHEMBL438139 ROCAGLAMIDE k_off = - s-1 -
CHEMBL466993 kon = - -
CHEMBL466993 k_off = - s-1 -
CHEMBL5834204 kon = - -
CHEMBL5834204 k_off = - s-1 -
CHEMBL466993 kon = - -
CHEMBL466993 k_off = - s-1 -