Assay Detail
Binding
CHEMBL5731388
Review assay metadata, readout intent, target linkage, and publication context from the same page.
Cell Surface Biotinylation Assay: Huh7.5.1 cells from four 150 mm plates were treated with DMSO, Roc-A (20 nM), or infected by HCVcc. 48 h post-transfection, cells were washed three times with ice-cold PBS and resuspended in PBS at a density of 25×106 cells/ml. Freshly prepared Sulfo-NHS-SS-biotin (Pierce) was added to the cells (final concentration 0.5 μg/ml) and allowed to incubate at 4° C. for 30 min. Cells were then washed three times with ice-cold PBS. 25 mM Tris (pH 8.0) was added in the initial wash to quench any non-reacted biotin reagent. Following cell lysis in RIPA buffer (50 mM Tris-HCl [pH 7.5], 150 mM NaCl, 1% NP-40, 0.25% sodium deoxycholate, 1 mM EDTA, 2 mM Na3VO4 and Pierce protease inhibitor cocktail), lysates were cleared by centrifugation at 13,000×g for 15 min at 4° C. The cleared lysates were used for immunoprecipitation using a 1:1 mixture of Streptavidin beads (Pierce). Beads were washed three times with RIPA buffer, and bound proteins were eluted by boiling the samples in SDS-PAGE sample buffer and then resolved on 9% SDS-PAGE. Biotinylated proteins were detected by anti-PHB1 and anti-PHB2 antibodies.
15
Total Activities
4
Compounds Tested
3
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Confidence | 0 — Uncurated / Unknown |
| Curated By | Autocuration |
Publication
Aglaroxin C and derivatives as HCV entry inhibitors
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| EC50 | 5 | 6.70 | 8.40 |
| kon | 5 | - | - |
| k_off | 5 | - | - |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL438139 | ROCAGLAMIDE | — | 3 | 8.40 |
| CHEMBL466993 | — | — | 6 | 7.00 |
| CHEMBL5834204 | — | — | 3 | 4.70 |
| CHEMBL5747434 | — | — | 3 | - |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL438139 | ROCAGLAMIDE | EC50 | = | 4.0 | nM | 8.40 |
| CHEMBL466993 | — | EC50 | = | 100.0 | nM | 7.00 |
| CHEMBL466993 | — | EC50 | = | 200.0 | nM | 6.70 |
| CHEMBL5834204 | — | EC50 | = | 20000.0 | nM | 4.70 |
| CHEMBL5747434 | — | EC50 | > | 200000000.0 | nM | - |
| CHEMBL5747434 | — | kon | = | - | — | - |
| CHEMBL5747434 | — | k_off | = | - | s-1 | - |
| CHEMBL438139 | ROCAGLAMIDE | kon | = | - | — | - |
| CHEMBL438139 | ROCAGLAMIDE | k_off | = | - | s-1 | - |
| CHEMBL466993 | — | kon | = | - | — | - |
| CHEMBL466993 | — | k_off | = | - | s-1 | - |
| CHEMBL5834204 | — | kon | = | - | — | - |
| CHEMBL5834204 | — | k_off | = | - | s-1 | - |
| CHEMBL466993 | — | kon | = | - | — | - |
| CHEMBL466993 | — | k_off | = | - | s-1 | - |