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Assay Detail

CHEMBL5732066

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Binding
Kinase Inhibition Assay: Measurement of the kinase inhibitory activity of each compound produced in Examples was conducted using the Off-chip Mobility Shift Assay. For this test, a human recombinant VEGF receptor 2 was prepared in a baculovirus expression system. A recombinant protein was expressed as a GST fusion protein by using 790-1356 amino acids of a cytosolic domain in the VEGF receptor 2 (NP 002244.1) and binding a glutathione-S-transferase (GST) to N-terminal thereof. The expressed GST-VEGF receptor 2 fusion protein was purified using glutathione-sepharose chromatography. In addition, the test substance was dissolved in dimethylsulfoxide to prepare a solution at a concentration about 100 times higher than the test concentration. Furthermore, the solution was diluted with an assay buffer (20 mM HEPES, 0.01% Triton X-100 and 2 mM DTT, pH7.5) by 25 times to prepare a 4-time concentrated test substance solution. In the kinase inhibition assay, CSKtide was used as a substrate. In the kinase reaction, 10 mL of 2-time concentrated VEGF receptor 2 kinase solution, 5 mL of 4-time concentrated test substance solution prepared with the assay buffer, and 5 mL of 4-time concentrated substrate/ATP/metal solution were mixed in wells of a polypropylene 384-well plate, and reacted at room temperature for 1 hour (substrate concentration: CSKtide 1000 nM, ATP concentration: 75 μM, Magnesium: 5 mM). One hour after, 60 mL of Termination Buffer (QuickScout Screening Assist MSA) was added so as to terminate the reaction. After that, the substrate peptide and the phosphorylated peptide in the reaction solution were separated by LabChip3000 system (Caliper Life Science), and the both peptides were quantified.
144
Total Activities
48
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Vascular endothelial growth factor receptor 2 (CHEMBL279)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Alkynyl indazole derivative and use thereof
(2017)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 48 8.25 9.04
kon 48 - -
k_off 48 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL1289926 AXITINIB 4.0 3 9.04
CHEMBL6026983 3 8.55
CHEMBL5977177 3 8.54
CHEMBL5747825 3 8.51
CHEMBL6045768 3 8.47
CHEMBL5997277 3 8.46
CHEMBL5886819 3 8.43
CHEMBL5962372 3 8.43
CHEMBL5774740 3 8.41
CHEMBL5758936 3 8.41
CHEMBL5801395 3 8.40
CHEMBL5975909 3 8.40
CHEMBL5972476 3 8.38
CHEMBL5955635 3 8.38
CHEMBL5764170 3 8.38
CHEMBL5889358 3 8.37
CHEMBL6063694 3 8.35
CHEMBL6036354 3 8.34
CHEMBL5950687 3 8.33
CHEMBL5786647 3 8.32
CHEMBL5843185 3 8.31
CHEMBL5803292 3 8.29
CHEMBL6000994 3 8.28
CHEMBL5766792 3 8.26
CHEMBL5818269 3 8.26
CHEMBL5881624 3 8.24
CHEMBL5939621 3 8.24
CHEMBL5973692 3 8.23
CHEMBL5917376 3 8.23
CHEMBL5996041 3 8.21

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL1289926 AXITINIB IC50 = 0.91 nM 9.04
CHEMBL6026983 IC50 = 2.8 nM 8.55
CHEMBL5977177 IC50 = 2.9 nM 8.54
CHEMBL5747825 IC50 = 3.1 nM 8.51
CHEMBL6045768 IC50 = 3.4 nM 8.47
CHEMBL5997277 IC50 = 3.5 nM 8.46
CHEMBL5962372 IC50 = 3.7 nM 8.43
CHEMBL5886819 IC50 = 3.7 nM 8.43
CHEMBL5758936 IC50 = 3.9 nM 8.41
CHEMBL5774740 IC50 = 3.9 nM 8.41
CHEMBL5801395 IC50 = 4.0 nM 8.40
CHEMBL5975909 IC50 = 4.0 nM 8.40
CHEMBL5764170 IC50 = 4.2 nM 8.38
CHEMBL5972476 IC50 = 4.2 nM 8.38
CHEMBL5955635 IC50 = 4.2 nM 8.38
CHEMBL5889358 IC50 = 4.3 nM 8.37
CHEMBL6063694 IC50 = 4.5 nM 8.35
CHEMBL6036354 IC50 = 4.6 nM 8.34
CHEMBL5950687 IC50 = 4.7 nM 8.33
CHEMBL5786647 IC50 = 4.8 nM 8.32
CHEMBL5843185 IC50 = 4.9 nM 8.31
CHEMBL5803292 IC50 = 5.1 nM 8.29
CHEMBL6000994 IC50 = 5.2 nM 8.28
CHEMBL5766792 IC50 = 5.5 nM 8.26
CHEMBL5818269 IC50 = 5.5 nM 8.26
CHEMBL5881624 IC50 = 5.7 nM 8.24
CHEMBL5939621 IC50 = 5.8 nM 8.24
CHEMBL5917376 IC50 = 5.9 nM 8.23
CHEMBL5973692 IC50 = 5.9 nM 8.23
CHEMBL5996041 IC50 = 6.1 nM 8.21
CHEMBL6033887 IC50 = 6.4 nM 8.19
CHEMBL5954122 IC50 = 6.7 nM 8.17
CHEMBL5808657 IC50 = 7.2 nM 8.14
CHEMBL5862715 IC50 = 7.6 nM 8.12
CHEMBL5957859 IC50 = 7.7 nM 8.11
CHEMBL6036230 IC50 = 8.0 nM 8.10
CHEMBL5921174 IC50 = 7.9 nM 8.10
CHEMBL5956476 IC50 = 8.8 nM 8.06
CHEMBL5865447 IC50 = 8.9 nM 8.05
CHEMBL5980919 IC50 = 8.9 nM 8.05
CHEMBL5928191 IC50 = 9.2 nM 8.04
CHEMBL5973505 IC50 = 9.7 nM 8.01
CHEMBL5909240 IC50 = 10.0 nM 8.00
CHEMBL5865064 IC50 = 9.9 nM 8.00
CHEMBL5804567 IC50 = 11.0 nM 7.96
CHEMBL6053810 IC50 = 12.0 nM 7.92
CHEMBL5977772 IC50 = 13.0 nM 7.89
CHEMBL5894064 IC50 = 15.0 nM 7.82
CHEMBL5804567 kon = - -
CHEMBL5818269 kon = - -