Assay Detail
Binding
CHEMBL5732066
Review assay metadata, readout intent, target linkage, and publication context from the same page.
Kinase Inhibition Assay: Measurement of the kinase inhibitory activity of each compound produced in Examples was conducted using the Off-chip Mobility Shift Assay. For this test, a human recombinant VEGF receptor 2 was prepared in a baculovirus expression system. A recombinant protein was expressed as a GST fusion protein by using 790-1356 amino acids of a cytosolic domain in the VEGF receptor 2 (NP 002244.1) and binding a glutathione-S-transferase (GST) to N-terminal thereof. The expressed GST-VEGF receptor 2 fusion protein was purified using glutathione-sepharose chromatography. In addition, the test substance was dissolved in dimethylsulfoxide to prepare a solution at a concentration about 100 times higher than the test concentration. Furthermore, the solution was diluted with an assay buffer (20 mM HEPES, 0.01% Triton X-100 and 2 mM DTT, pH7.5) by 25 times to prepare a 4-time concentrated test substance solution. In the kinase inhibition assay, CSKtide was used as a substrate. In the kinase reaction, 10 mL of 2-time concentrated VEGF receptor 2 kinase solution, 5 mL of 4-time concentrated test substance solution prepared with the assay buffer, and 5 mL of 4-time concentrated substrate/ATP/metal solution were mixed in wells of a polypropylene 384-well plate, and reacted at room temperature for 1 hour (substrate concentration: CSKtide 1000 nM, ATP concentration: 75 μM, Magnesium: 5 mM). One hour after, 60 mL of Termination Buffer (QuickScout Screening Assist MSA) was added so as to terminate the reaction. After that, the substrate peptide and the phosphorylated peptide in the reaction solution were separated by LabChip3000 system (Caliper Life Science), and the both peptides were quantified.
144
Total Activities
48
Compounds Tested
3
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Organism | Homo sapiens |
| Confidence | 9 — Direct single protein target |
| Curated By | Autocuration |
Target
Vascular endothelial growth factor receptor 2 (CHEMBL279) ↗| Type | SINGLE PROTEIN |
| Organism | Homo sapiens |
Publication
Alkynyl indazole derivative and use thereof
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 48 | 8.25 | 9.04 |
| kon | 48 | - | - |
| k_off | 48 | - | - |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL1289926 | AXITINIB | 4.0 | 3 | 9.04 |
| CHEMBL6026983 | — | — | 3 | 8.55 |
| CHEMBL5977177 | — | — | 3 | 8.54 |
| CHEMBL5747825 | — | — | 3 | 8.51 |
| CHEMBL6045768 | — | — | 3 | 8.47 |
| CHEMBL5997277 | — | — | 3 | 8.46 |
| CHEMBL5886819 | — | — | 3 | 8.43 |
| CHEMBL5962372 | — | — | 3 | 8.43 |
| CHEMBL5774740 | — | — | 3 | 8.41 |
| CHEMBL5758936 | — | — | 3 | 8.41 |
| CHEMBL5801395 | — | — | 3 | 8.40 |
| CHEMBL5975909 | — | — | 3 | 8.40 |
| CHEMBL5972476 | — | — | 3 | 8.38 |
| CHEMBL5955635 | — | — | 3 | 8.38 |
| CHEMBL5764170 | — | — | 3 | 8.38 |
| CHEMBL5889358 | — | — | 3 | 8.37 |
| CHEMBL6063694 | — | — | 3 | 8.35 |
| CHEMBL6036354 | — | — | 3 | 8.34 |
| CHEMBL5950687 | — | — | 3 | 8.33 |
| CHEMBL5786647 | — | — | 3 | 8.32 |
| CHEMBL5843185 | — | — | 3 | 8.31 |
| CHEMBL5803292 | — | — | 3 | 8.29 |
| CHEMBL6000994 | — | — | 3 | 8.28 |
| CHEMBL5766792 | — | — | 3 | 8.26 |
| CHEMBL5818269 | — | — | 3 | 8.26 |
| CHEMBL5881624 | — | — | 3 | 8.24 |
| CHEMBL5939621 | — | — | 3 | 8.24 |
| CHEMBL5973692 | — | — | 3 | 8.23 |
| CHEMBL5917376 | — | — | 3 | 8.23 |
| CHEMBL5996041 | — | — | 3 | 8.21 |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL1289926 | AXITINIB | IC50 | = | 0.91 | nM | 9.04 |
| CHEMBL6026983 | — | IC50 | = | 2.8 | nM | 8.55 |
| CHEMBL5977177 | — | IC50 | = | 2.9 | nM | 8.54 |
| CHEMBL5747825 | — | IC50 | = | 3.1 | nM | 8.51 |
| CHEMBL6045768 | — | IC50 | = | 3.4 | nM | 8.47 |
| CHEMBL5997277 | — | IC50 | = | 3.5 | nM | 8.46 |
| CHEMBL5962372 | — | IC50 | = | 3.7 | nM | 8.43 |
| CHEMBL5886819 | — | IC50 | = | 3.7 | nM | 8.43 |
| CHEMBL5758936 | — | IC50 | = | 3.9 | nM | 8.41 |
| CHEMBL5774740 | — | IC50 | = | 3.9 | nM | 8.41 |
| CHEMBL5801395 | — | IC50 | = | 4.0 | nM | 8.40 |
| CHEMBL5975909 | — | IC50 | = | 4.0 | nM | 8.40 |
| CHEMBL5764170 | — | IC50 | = | 4.2 | nM | 8.38 |
| CHEMBL5972476 | — | IC50 | = | 4.2 | nM | 8.38 |
| CHEMBL5955635 | — | IC50 | = | 4.2 | nM | 8.38 |
| CHEMBL5889358 | — | IC50 | = | 4.3 | nM | 8.37 |
| CHEMBL6063694 | — | IC50 | = | 4.5 | nM | 8.35 |
| CHEMBL6036354 | — | IC50 | = | 4.6 | nM | 8.34 |
| CHEMBL5950687 | — | IC50 | = | 4.7 | nM | 8.33 |
| CHEMBL5786647 | — | IC50 | = | 4.8 | nM | 8.32 |
| CHEMBL5843185 | — | IC50 | = | 4.9 | nM | 8.31 |
| CHEMBL5803292 | — | IC50 | = | 5.1 | nM | 8.29 |
| CHEMBL6000994 | — | IC50 | = | 5.2 | nM | 8.28 |
| CHEMBL5766792 | — | IC50 | = | 5.5 | nM | 8.26 |
| CHEMBL5818269 | — | IC50 | = | 5.5 | nM | 8.26 |
| CHEMBL5881624 | — | IC50 | = | 5.7 | nM | 8.24 |
| CHEMBL5939621 | — | IC50 | = | 5.8 | nM | 8.24 |
| CHEMBL5917376 | — | IC50 | = | 5.9 | nM | 8.23 |
| CHEMBL5973692 | — | IC50 | = | 5.9 | nM | 8.23 |
| CHEMBL5996041 | — | IC50 | = | 6.1 | nM | 8.21 |
| CHEMBL6033887 | — | IC50 | = | 6.4 | nM | 8.19 |
| CHEMBL5954122 | — | IC50 | = | 6.7 | nM | 8.17 |
| CHEMBL5808657 | — | IC50 | = | 7.2 | nM | 8.14 |
| CHEMBL5862715 | — | IC50 | = | 7.6 | nM | 8.12 |
| CHEMBL5957859 | — | IC50 | = | 7.7 | nM | 8.11 |
| CHEMBL6036230 | — | IC50 | = | 8.0 | nM | 8.10 |
| CHEMBL5921174 | — | IC50 | = | 7.9 | nM | 8.10 |
| CHEMBL5956476 | — | IC50 | = | 8.8 | nM | 8.06 |
| CHEMBL5865447 | — | IC50 | = | 8.9 | nM | 8.05 |
| CHEMBL5980919 | — | IC50 | = | 8.9 | nM | 8.05 |
| CHEMBL5928191 | — | IC50 | = | 9.2 | nM | 8.04 |
| CHEMBL5973505 | — | IC50 | = | 9.7 | nM | 8.01 |
| CHEMBL5909240 | — | IC50 | = | 10.0 | nM | 8.00 |
| CHEMBL5865064 | — | IC50 | = | 9.9 | nM | 8.00 |
| CHEMBL5804567 | — | IC50 | = | 11.0 | nM | 7.96 |
| CHEMBL6053810 | — | IC50 | = | 12.0 | nM | 7.92 |
| CHEMBL5977772 | — | IC50 | = | 13.0 | nM | 7.89 |
| CHEMBL5894064 | — | IC50 | = | 15.0 | nM | 7.82 |
| CHEMBL5804567 | — | kon | = | - | — | - |
| CHEMBL5818269 | — | kon | = | - | — | - |