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Assay Detail

CHEMBL5732434

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Stabilization of HIF-1alpha: The compounds were formulated with DMSO to form 30 mM stock solutions, and then formulated with analytical nutrient solution to form 2× working solutions, and seven final concentrations, 0.03, 0.1, 0.3, 1, 3, 10, 30 μM, were used for screening and obtaining dose-effect relationship. Positive compound bipyridine was formulated with DMSO to form 100 mM mother solution, and then formulated with analytical nutrient solution to form 2× working solution. The positive compound bipyridine in final concentration of 100 μM was used as control, and analytic nutrient solution with DMSO in a final concentration of 3 was used as solvent control.CHOhIR cells (purchased from Thermo Fisher Scientific) which stably expressed EGFP-HIF-1α fusion protein were cultured under 37° C. and 5% CO2 in F12 culture solution containing 0.5 mg/ml G418 and 10% FBS, transplanted in an amount of 0.8×104 cells/100 μl/well on a 96-well culture plate that could be subjected to fluorescence detection, and cultured under 37° C. and 5% CO2 for 18-24 h. The cells were washed with analytical nutritional solution in amount of 100 μl/well, added with analytical nutritional solution in amount of 100 μl/well, added with 2× drug in amount of 100 μl/well, and each concentration was repeated in 3 wells in parallel way. After the cells were incubated under 37° C. and 5% CO2 for 3 h, 12% formaldehyde in amount of 100 μl/well was added, fixation was carried out at room temperature for 30 min. Culture media was discarded, and the plate was washed with PBS twice, PBS containing 1 μM Hoechst was used, staining was performed at room temperature for 1 h. Detection was performed by IN Cell Analyzer 1000 live cell imaging system. Detection conditions were: 20× objective lens, excitation wavelength Ex=460 nm, emission wavelength Em=535 nm, exposure 300 ms to detect blue-fluorescence of cell nucleus passage; excitation wavelength Ex=475 nm, emission wavelength Em=535 nm, exposure 500 ms to detect green-fluorescence EGFP of cytoplasm passage, and pictures were taken continuously in 5 fields of view for each well. IN Cell Analyzer 1000 Multitarget Analysis Module of GE Company was used for analyzing aggregation of green-fluorescence of HIF-1α in cell nucleus, and BP100 μM treatment group was used as 100% activation of HIF-1α.
78
Total Activities
26
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Hypoxia-inducible factor 1-alpha (CHEMBL4261)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Substituted acethydrazide derivative, preparation method and use thereof
(2019)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
EC50 26 5.73 6.89
kon 26 - -
k_off 26 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5871412 3 6.89
CHEMBL5741992 3 6.77
CHEMBL6025217 3 6.28
CHEMBL5776581 3 6.25
CHEMBL5942162 3 6.22
CHEMBL5888356 3 6.12
CHEMBL5799798 3 6.11
CHEMBL5881909 3 6.10
CHEMBL5813576 3 6.09
CHEMBL5830133 3 6.08
CHEMBL6023836 3 6.01
CHEMBL5825452 3 5.99
CHEMBL5819977 3 5.73
CHEMBL5820812 3 5.68
CHEMBL5745717 3 5.64
CHEMBL5971418 3 5.64
CHEMBL5964617 3 5.56
CHEMBL5967266 3 5.56
CHEMBL6052833 3 5.56
CHEMBL5742337 3 5.28
CHEMBL6019735 3 5.14
CHEMBL5763475 3 5.11
CHEMBL6058576 3 5.08
CHEMBL5949156 3 4.95
CHEMBL5836682 3 4.75
CHEMBL39879 DIPYRIDYL 3 4.38

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5871412 EC50 = 130.0 nM 6.89
CHEMBL5741992 EC50 = 170.0 nM 6.77
CHEMBL6025217 EC50 = 530.0 nM 6.28
CHEMBL5776581 EC50 = 560.0 nM 6.25
CHEMBL5942162 EC50 = 600.0 nM 6.22
CHEMBL5888356 EC50 = 760.0 nM 6.12
CHEMBL5799798 EC50 = 780.0 nM 6.11
CHEMBL5881909 EC50 = 800.0 nM 6.10
CHEMBL5813576 EC50 = 820.0 nM 6.09
CHEMBL5830133 EC50 = 830.0 nM 6.08
CHEMBL6023836 EC50 = 980.0 nM 6.01
CHEMBL5825452 EC50 = 1020.0 nM 5.99
CHEMBL5819977 EC50 = 1860.0 nM 5.73
CHEMBL5820812 EC50 = 2110.0 nM 5.68
CHEMBL5971418 EC50 = 2290.0 nM 5.64
CHEMBL5745717 EC50 = 2280.0 nM 5.64
CHEMBL5967266 EC50 = 2770.0 nM 5.56
CHEMBL6052833 EC50 = 2760.0 nM 5.56
CHEMBL5964617 EC50 = 2770.0 nM 5.56
CHEMBL5742337 EC50 = 5230.0 nM 5.28
CHEMBL6019735 EC50 = 7190.0 nM 5.14
CHEMBL5763475 EC50 = 7750.0 nM 5.11
CHEMBL6058576 EC50 = 8420.0 nM 5.08
CHEMBL5949156 EC50 = 11200.0 nM 4.95
CHEMBL5836682 EC50 = 17800.0 nM 4.75
CHEMBL39879 DIPYRIDYL EC50 = 41350.0 nM 4.38
CHEMBL6025217 kon = - -
CHEMBL5971418 k_off = - s-1 -
CHEMBL5971418 kon = - -
CHEMBL5741992 k_off = - s-1 -
CHEMBL39879 DIPYRIDYL kon = - -
CHEMBL5871412 k_off = - s-1 -
CHEMBL5871412 kon = - -
CHEMBL5819977 k_off = - s-1 -
CHEMBL5819977 kon = - -
CHEMBL6052833 k_off = - s-1 -
CHEMBL6052833 kon = - -
CHEMBL6025217 k_off = - s-1 -
CHEMBL6023836 k_off = - s-1 -
CHEMBL5967266 k_off = - s-1 -
CHEMBL5967266 kon = - -
CHEMBL6058576 k_off = - s-1 -
CHEMBL6058576 kon = - -
CHEMBL5763475 k_off = - s-1 -
CHEMBL6019735 kon = - -
CHEMBL5763475 kon = - -
CHEMBL6019735 k_off = - s-1 -
CHEMBL5813576 k_off = - s-1 -
CHEMBL6023836 kon = - -
CHEMBL39879 DIPYRIDYL k_off = - s-1 -