Skip to main content
Free research Free research Free assay review with research home and workspace preview
Quick search ChEMBL 36
Assay Detail

CHEMBL5733562

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
In Vitro Assay: MMP-13(2): The basis for the assay is the cleavage of the substrate 520 MMP-fret substrate XV (Anaspec, Catalog #: AS-60582-01) by human MMP13 (Chemicon, Cat # CC068). For the dose response (10 point), 4 uL of a dilution series of compound (2 mM highest concentration, 1/5 dilution in DMSO further diluted 1 in 10 in water, corresponding to a final highest concentration of 20 uM), is transferred to 384 well Fluotrac 200 plate (Greiner, cat #781076) and incubated at room temperature for 30 min with a 26 uL buffer solution (50 mM Tris pH7.5, 150 mM NaCl, 10 mM CaCl2, 0.05% CHAPS, 5 uM ZnCl2) containing MMP13 (6.25 10-6 ug/uL) (it will be appreciated by the skilled person that the potency read out is independent of the enzyme concentration). The reaction is initiated by adding to the assay plate 520 MMP-fret substrate XV (10 uL, 4 uM) in the same buffer. Finally, the fluorescence is read on the Envision (Perkin Elmer) after an incubation of 60 min at room temperature (Excitation 485 nm, Emission 530).
54
Total Activities
18
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Collagenase 3 (CHEMBL280)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

5-[(piperazin-1-yl)-3-oxo-propyl]-imidazolidine-2,4-dione derivatives as ADAMTS inhibitors for the treatment of osteoarthritis
(2018)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 18 6.12 7.12
kon 18 - -
k_off 18 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL6060037 3 7.12
CHEMBL5992754 3 6.54
CHEMBL5884896 3 6.44
CHEMBL6003550 3 5.83
CHEMBL4846698 3 5.67
CHEMBL5972028 3 5.62
CHEMBL6043112 3 5.60
CHEMBL5769458 3 -
CHEMBL5780975 3 -
CHEMBL5863795 3 -
CHEMBL5820536 3 -
CHEMBL4870479 3 -
CHEMBL5864715 3 -
CHEMBL4859417 3 -
CHEMBL5822950 3 -
CHEMBL5926645 3 -
CHEMBL4878543 3 -
CHEMBL5741734 3 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL6060037 IC50 = 76.4 nM 7.12
CHEMBL5992754 IC50 = 285.0 nM 6.54
CHEMBL5884896 IC50 = 366.0 nM 6.44
CHEMBL6003550 IC50 = 1480.0 nM 5.83
CHEMBL4846698 IC50 = 2150.0 nM 5.67
CHEMBL5972028 IC50 = 2370.0 nM 5.62
CHEMBL6043112 IC50 = 2520.0 nM 5.60
CHEMBL5741734 kon = - -
CHEMBL4859417 IC50 > 20000.0 nM -
CHEMBL5741734 IC50 > 20000.0 nM -
CHEMBL5972028 k_off = - s-1 -
CHEMBL5972028 kon = - -
CHEMBL5992754 k_off = - s-1 -
CHEMBL5992754 kon = - -
CHEMBL4859417 k_off = - s-1 -
CHEMBL4859417 kon = - -
CHEMBL4878543 k_off = - s-1 -
CHEMBL5822950 kon = - -
CHEMBL5741734 k_off = - s-1 -
CHEMBL4878543 IC50 > 4000.0 nM -
CHEMBL4878543 kon = - -
CHEMBL5884896 k_off = - s-1 -
CHEMBL5926645 IC50 > 20000.0 nM -
CHEMBL5926645 kon = - -
CHEMBL5926645 k_off = - s-1 -
CHEMBL6043112 kon = - -
CHEMBL6043112 k_off = - s-1 -
CHEMBL5822950 IC50 > 20000.0 nM -
CHEMBL5820536 kon = - -
CHEMBL4846698 k_off = - s-1 -
CHEMBL5864715 IC50 > 20000.0 nM -
CHEMBL4846698 kon = - -
CHEMBL5820536 k_off = - s-1 -
CHEMBL5864715 kon = - -
CHEMBL5864715 k_off = - s-1 -
CHEMBL4870479 IC50 > 20000.0 nM -
CHEMBL4870479 kon = - -
CHEMBL4870479 k_off = - s-1 -
CHEMBL5820536 IC50 > 20000.0 nM -
CHEMBL5769458 kon = - -
CHEMBL5769458 k_off = - s-1 -
CHEMBL5863795 IC50 > 20000.0 nM -
CHEMBL5863795 kon = - -
CHEMBL5863795 k_off = - s-1 -
CHEMBL5780975 IC50 > 20000.0 nM -
CHEMBL5780975 kon = - -
CHEMBL5780975 k_off = - s-1 -
CHEMBL6003550 kon = - -
CHEMBL6003550 k_off = - s-1 -
CHEMBL5769458 IC50 > 20000.0 nM -