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Assay Detail

CHEMBL5733597

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Binding
NATIVE RECEPTOR BINDING ASSA: The binding of 125I-CGRP to receptors in SK-N-MC cell membranes was carried out essentially as described (Edvinsson et al. (2001) Eur. J. Pharmacol. 415, 39-44). Briefly, membranes (25 μg) were incubated in 1 mL of binding buffer [10 mM HEPES, pH 7.4, 5 mM MgCl2 and 0.2% bovine serum albumin (BSA)] containing 10 pM 125I-CGRP and antagonist. After incubation at room temperature for 3 h, the assay was terminated by filtration through GFB glass fibre filter plates (PerkinElmer) that had been blocked with 0.5% polyethyleneimine for 3 h. The filters were washed three times with ice-cold assay buffer (10 mM HEPES, pH 7.4 and 5 mM MgCl2), then the plates were air dried. Scintillation fluid (50 μL) was added and the radioactivity was counted on a Topcount (Packard Instrument). Data analysis was carried out by using Prism and the Ki was determined by using the Cheng-Prusoff equation (Cheng & Prusoff (1973) Biochem. Pharmacol. 22, 3099-3108).Cells expressing recombinant human CL receptor/RAMP1 were washed with PBS and harvested in harvest buffer containing 50 mM HEPES, 1 mM EDTA and Complete™ protease inhibitors (Roche). The cell suspension was disrupted with a laboratory homogenizer and centrifuged at 48,000 g to isolate membranes. The pellets were resuspended in harvest buffer plus 250 mM sucrose and stored at −70° C. For binding assays, 20 μg of membranes were incubated in 1 mL binding buffer (10 mM HEPES, pH 7.4, 5 mM MgCl2, and 0.2% BSA) for 3 h at room temperature containing 10 pM 125I-hCGRP (GE Healthcare) and antagonist. The assay was terminated by filtration through 96-well GFB glass fiber filter plates (PerkinElmer) that had been blocked with 0.05% polyethyleneimine. The filters were washed 3 times with ice-cold assay buffer (10 mM HEPES, pH 7.4, and 5 mM MgCl2). Scintillation fluid was added and the plates were counted on a Topcount (Packard). Non-specific binding was determined and the data analysis was carried out with the apparent dissociation constant (Ki) determined by using a non-linear least squares fitting the bound CPM data to the equation below:Y obsd = ( Y max - Y min ) ⁢ ( % ⁢ ⁢ I max - % ⁢ Imin ⁢ / ⁢ 100 ) + Y min + ( Y max - Y min ) ⁢ ( 100 - % ⁢ ⁢ I max ⁢ / ⁢ 100 ) 1 + ( [ Drug ] ⁢ / ⁢ K i ⁡ ( 1 + [ Radiolabel ] ⁢ / ⁢ K d ) nH Where Y is observed CPM bound, Ymax is total bound counts, Ymin is non specific bound counts, (Ymax−Ymin) is specific bound counts, % Imax is the maximum percent inhibition, % I min is the minimum percent inhibition, radiolabel is the probe, and the Kd is the apparent dissociation constant for the radioligand for the receptor as determined by hot saturation experiments.
42
Total Activities
14
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

Calcitonin gene-related peptide type 1 receptor (CHEMBL3798)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Piperidinone carboxamide azaindane CGRP receptor antagonists
(2019)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
Ki 14 9.65 10.82
kon 14 - -
k_off 14 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3991065 ATOGEPANT 4.0 3 10.82
CHEMBL3990832 3 10.77
CHEMBL5924874 3 10.26
CHEMBL2364638 UBROGEPANT 4.0 3 10.17
CHEMBL3944519 3 10.17
CHEMBL3971313 3 10.03
CHEMBL3924687 3 9.85
CHEMBL3921970 3 9.77
CHEMBL3928929 3 9.68
CHEMBL3931680 3 9.60
CHEMBL3977466 3 8.77
CHEMBL3929072 3 8.72
CHEMBL3974988 3 8.37
CHEMBL3938378 3 8.13

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3991065 ATOGEPANT Ki = 0.015 nM 10.82
CHEMBL3990832 Ki = 0.017 nM 10.77
CHEMBL5924874 Ki = 0.055 nM 10.26
CHEMBL2364638 UBROGEPANT Ki = 0.067 nM 10.17
CHEMBL3944519 Ki = 0.067 nM 10.17
CHEMBL3971313 Ki = 0.093 nM 10.03
CHEMBL3924687 Ki = 0.14 nM 9.85
CHEMBL3921970 Ki = 0.17 nM 9.77
CHEMBL3928929 Ki = 0.21 nM 9.68
CHEMBL3931680 Ki = 0.25 nM 9.60
CHEMBL3977466 Ki = 1.7 nM 8.77
CHEMBL3929072 Ki = 1.9 nM 8.72
CHEMBL3974988 Ki = 4.3 nM 8.37
CHEMBL3938378 Ki = 7.4 nM 8.13
CHEMBL3944519 kon = - -
CHEMBL3944519 k_off = - s-1 -
CHEMBL3991065 ATOGEPANT kon = - -
CHEMBL3991065 ATOGEPANT k_off = - s-1 -
CHEMBL3990832 kon = - -
CHEMBL3990832 k_off = - s-1 -
CHEMBL3924687 kon = - -
CHEMBL3928929 k_off = - s-1 -
CHEMBL3931680 kon = - -
CHEMBL3931680 k_off = - s-1 -
CHEMBL5924874 kon = - -
CHEMBL5924874 k_off = - s-1 -
CHEMBL3971313 kon = - -
CHEMBL3971313 k_off = - s-1 -
CHEMBL2364638 UBROGEPANT k_off = - s-1 -
CHEMBL2364638 UBROGEPANT kon = - -
CHEMBL3928929 kon = - -
CHEMBL3977466 k_off = - s-1 -
CHEMBL3929072 k_off = - s-1 -
CHEMBL3929072 kon = - -
CHEMBL3938378 k_off = - s-1 -
CHEMBL3938378 kon = - -
CHEMBL3921970 k_off = - s-1 -
CHEMBL3921970 kon = - -
CHEMBL3974988 kon = - -
CHEMBL3924687 k_off = - s-1 -
CHEMBL3977466 kon = - -
CHEMBL3974988 k_off = - s-1 -