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Assay Detail

CHEMBL5733958

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Binding
in vitro kinase inhibition assay: Inhibitory activity can be determined routinely using known methods and also from commercial vendors offering this service for kinases and bromodomain proteins. For example, in vitro kinase inhibition (e.g., PI3K inhibition) can be detected by a standard kinase inhibition assay using labeled ATP to determine if a test compound inhibits the transfer of phosphate from ATP to the kinase substrate. In vivo, PI3K inhibition can be determined from target tissue biopsies by standard tissue processing to disrupt cells and then performing Western Blot analysis to determine the presence or absence of pAKT (substrate of PI3K) relative to a control sample. The activity of a compound of the invention as an inhibitor of a bromodomain-containing protein, such as a BET protein, such as BRD2, BRD3, BRD4, and/or BRDT, or an isoform or mutant thereof, may be determined in vitro, in vivo, or in a cell line. In vitro assays include assays that determine inhibition of bromodomain-containing proteins. Alternatively, inhibitor binding may be determined by running a competition experiment where a provided compound is incubated with a bromodomain-containing protein, such as a BET protein bound to known ligands, labeled or unlabeled. For example, bromodomain inhibition can be determined in vitro using Alpha Screen Technology (http://www.reactionbiology.com/webapps/site/NewsPDFs/Bromodomain%20Assay%20Platform%20for%20Drug%20Screening%20and%20Discovery.pdf). In vivo bromodomain inhibition can be determined indirectly by evaluating the amount of protein present of proteins whose genes' transcription is influenced or controlled by the bromodomain protein, for example, the MYCN protein transcription is controlled by BRD4 (J. E. Delmore et al., Cell 2011, 146, 904-917; A. Puissant, Cancer Discov. 2013, 3, 308-323). Bromodomain inhibition may also be predicted by in silico modeling as described below in the Examples.
18
Total Activities
6
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Phosphatidylinositol 3-kinase regulatory subunit beta (CHEMBL4437)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Thienopyranones as kinase and epigenetic inhibitors
(2019)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 6 5.91 6.67
kon 6 - -
k_off 6 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL2322228 3 6.67
CHEMBL2322239 3 6.42
CHEMBL98350 LY-294002 -1.0 3 6.13
CHEMBL2326952 3 5.76
CHEMBL2326953 3 5.44
CHEMBL2322246 3 5.03

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL2322228 IC50 = 214.0 nM 6.67
CHEMBL2322239 IC50 = 378.0 nM 6.42
CHEMBL98350 LY-294002 IC50 = 736.0 nM 6.13
CHEMBL2326952 IC50 = 1750.0 nM 5.76
CHEMBL2326953 IC50 = 3600.0 nM 5.44
CHEMBL2322246 IC50 = 9247.0 nM 5.03
CHEMBL98350 LY-294002 kon = - -
CHEMBL98350 LY-294002 k_off = - s-1 -
CHEMBL2322228 kon = - -
CHEMBL2322228 k_off = - s-1 -
CHEMBL2326953 kon = - -
CHEMBL2326953 k_off = - s-1 -
CHEMBL2326952 kon = - -
CHEMBL2326952 k_off = - s-1 -
CHEMBL2322246 kon = - -
CHEMBL2322246 k_off = - s-1 -
CHEMBL2322239 kon = - -
CHEMBL2322239 k_off = - s-1 -