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Assay Detail

CHEMBL5735968

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
In Vitro Assay: In general, Trex HEK293 cells were stably transfected with an inducible expression vector containing the full-length cDNA coding for the desired human sodium channel α-subunit and with an expression vector containing full length cDNA coding for the β1-subunit. Sodium channel expressing cell lines were induced with tetracycline (1 μg/mL) and plated on 384-well PDL-coated plates at a density of 25K-30K cells/well in culture media (DMEM, containing 10% FBS and 1% L-glutamine). After overnight incubation (37° C., 5% CO2), culture media was removed and cells were loaded with 5 uM ANG2 dye for 1-1.5 h in Buffer 1 (155 mM NMDG, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, 10 mM HEPES, 10 mM glucose, adjusted with Tris to pH 7.4). Access dye was removed and cells were incubated with test compounds for 1 hr in buffer 1 containing sodium channel modulator(s) at room temperature. Hamamatsu FDSS μCell was used to perform a 1:1 addition of Na/K challenge buffer (140 mM NaCl, 20 mM HEPES, 1 mM CaCl2, 15 mM KCl, 1 mM MgCl2, 10 mM glucose, adjusted with Tris to pH 7.4) and simultaneously read plates at excitation wavelength of 530 nm and emission wavelength set at 558 nm. Percent inhibition of sodium ion influx was calculated for each test compound at each test concentration to determine the IC50 values.
996
Total Activities
324
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Sodium channel protein type 8 subunit alpha (CHEMBL5202)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Benzenesulfonamide compounds and their use as therapeutic agents
(2020)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 332 6.03 8.30
kon 332 - -
k_off 332 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5818848 3 8.30
CHEMBL5954138 3 8.05
CHEMBL5751525 3 8.05
CHEMBL5833484 3 8.05
CHEMBL5871830 3 8.00
CHEMBL5964606 3 7.89
CHEMBL5761790 3 7.68
CHEMBL6060231 3 7.68
CHEMBL5756555 3 7.68
CHEMBL6014712 3 7.62
CHEMBL6030566 3 7.58
CHEMBL5900702 3 7.54
CHEMBL5988439 3 7.51
CHEMBL5838365 3 7.41
CHEMBL6016377 3 7.39
CHEMBL5964359 3 7.33
CHEMBL5757831 3 7.33
CHEMBL5885345 3 7.31
CHEMBL6029812 3 7.30
CHEMBL5847004 3 7.24
CHEMBL5802504 3 7.21
CHEMBL5949590 3 7.21
CHEMBL5879347 3 7.19
CHEMBL5994683 3 7.19
CHEMBL5916884 3 7.17
CHEMBL6018738 3 7.17
CHEMBL5843543 3 7.10
CHEMBL6035584 3 7.03
CHEMBL5979774 3 7.00
CHEMBL5775615 6 7.00

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5818848 IC50 = 5.0 nM 8.30
CHEMBL5833484 IC50 = 9.0 nM 8.05
CHEMBL5751525 IC50 = 9.0 nM 8.05
CHEMBL5954138 IC50 = 9.0 nM 8.05
CHEMBL5871830 IC50 = 10.0 nM 8.00
CHEMBL5964606 IC50 = 13.0 nM 7.89
CHEMBL5761790 IC50 = 21.0 nM 7.68
CHEMBL6060231 IC50 = 21.0 nM 7.68
CHEMBL5756555 IC50 = 21.0 nM 7.68
CHEMBL6014712 IC50 = 24.0 nM 7.62
CHEMBL6030566 IC50 = 26.0 nM 7.58
CHEMBL5900702 IC50 = 29.0 nM 7.54
CHEMBL5988439 IC50 = 31.0 nM 7.51
CHEMBL5838365 IC50 = 39.0 nM 7.41
CHEMBL6016377 IC50 = 41.0 nM 7.39
CHEMBL5757831 IC50 = 47.0 nM 7.33
CHEMBL5964359 IC50 = 47.0 nM 7.33
CHEMBL5885345 IC50 = 49.0 nM 7.31
CHEMBL6029812 IC50 = 50.0 nM 7.30
CHEMBL5847004 IC50 = 58.0 nM 7.24
CHEMBL5949590 IC50 = 62.0 nM 7.21
CHEMBL5802504 IC50 = 61.0 nM 7.21
CHEMBL5879347 IC50 = 64.0 nM 7.19
CHEMBL5994683 IC50 = 64.0 nM 7.19
CHEMBL6018738 IC50 = 67.0 nM 7.17
CHEMBL5916884 IC50 = 67.0 nM 7.17
CHEMBL5843543 IC50 = 79.0 nM 7.10
CHEMBL6035584 IC50 = 93.0 nM 7.03
CHEMBL5979774 IC50 = 100.0 nM 7.00
CHEMBL5775615 IC50 = 99.0 nM 7.00
CHEMBL5989155 IC50 = 127.0 nM 6.90
CHEMBL5973410 IC50 = 129.0 nM 6.89
CHEMBL5882235 IC50 = 146.0 nM 6.84
CHEMBL5891805 IC50 = 148.0 nM 6.83
CHEMBL5789241 IC50 = 153.0 nM 6.82
CHEMBL5951687 IC50 = 156.0 nM 6.81
CHEMBL5854122 IC50 = 155.0 nM 6.81
CHEMBL5923842 IC50 = 167.0 nM 6.78
CHEMBL6018773 IC50 = 176.0 nM 6.75
CHEMBL5936156 IC50 = 178.0 nM 6.75
CHEMBL5800801 IC50 = 182.0 nM 6.74
CHEMBL5782612 IC50 = 187.0 nM 6.73
CHEMBL5881194 IC50 = 185.0 nM 6.73
CHEMBL5768181 IC50 = 185.0 nM 6.73
CHEMBL5779277 IC50 = 190.0 nM 6.72
CHEMBL5872218 IC50 = 195.0 nM 6.71
CHEMBL6004228 IC50 = 203.0 nM 6.69
CHEMBL5909363 IC50 = 211.0 nM 6.68
CHEMBL5929055 IC50 = 209.0 nM 6.68
CHEMBL6017617 IC50 = 217.0 nM 6.66