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Assay Detail

CHEMBL5736734

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Binding
Inhibitory Activity Assay: 1. Take 10 mM stock solution of the test compound, in 96-well compound plate, DMSO was used to dilute the compound to an initial concentration of 100×, then this concentration was used as the first concentration, 3-fold diluted to make 10 serial concentrations; 1 μL each serial dilution was then added to 19 μL 1×reaction buffer to prepare 5×compound for use; 2 μL 5×compound was transferred from 96-well plate to 384-well plate; compound-free control well was added with 2 μL the following liquid: 1×reaction buffer with the addition of 1 μL DMSO; 2 μL 250 mM EDTA was added to the Min control well.2.1× reaction buffer was used to formulate the kinase, substrate and ATP into a 2.5×enzyme/substrate mixture and 2.5×ATP solution respectively. In the experiment, the final concentration of CDK4/CycD3 kinase is 0.76 ng/μL, the final concentration of ATP is 80 μM; the final concentration of CDK6/CycD3 kinase is 0.5 ng/μL, the final concentration of ATP is 50 μM; the final concentration of CDK2/CycA2 kinase is 0.86 ng/μL, the final concentration of ATP is 15 μM; the final concentration of CDK2/CycE1 kinase is 1.016 ng/μL, the final concentration of ATP is 20 μM; 2.5×enzyme/substrate mixture was added to a 384-well plate, incubated at room temperature for 5 minutes; then added with 2.5×ATP solution, reacted at room temperature for 30 minutes.3. LANCE® Detection Buffer was used, 1× to prepare 2×LANCE® Ultra Europium-anti-phospho-eIF4E-binding protein 1 (Thr37/46) for use. After the enzymatic reaction was continued for 30 minutes, 10 mM EDTA was added to 384-well plate and the mixture was reacted at room temperature for 5 minutes. Then LANCE® Ultra Europium-anti-phospho-eIF4E-binding protein 1 (Thr37/46) was added, reacted at room temperature for 1 hour.4. The 384-well plate was placed in HERAEUS Multifuge X1R centrifuge, centrifuged at 2000 rpm for 2 minutes; data were measured on EnVision™, 337 nM wavelength laser was used as the excitation light, test at RFU665 nM and RFU615 nM, and RFU665 nM/RFU615 nM×10000 was used as the final data for analysis.
96
Total Activities
31
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Cyclin-dependent kinase 5 (CHEMBL4036)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Substituted pyrimidines as cyclin-dependent kinase inhibitors
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 32 7.41 8.41
kon 32 - -
k_off 32 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5903034 3 8.41
CHEMBL5938059 3 8.14
CHEMBL6002674 3 8.08
CHEMBL4466497 3 7.94
CHEMBL5775091 3 7.84
CHEMBL4550287 3 7.82
CHEMBL5979966 3 7.81
CHEMBL5950534 6 7.80
CHEMBL5834090 3 7.67
CHEMBL5964401 3 7.65
CHEMBL5830076 3 7.55
CHEMBL5933703 3 7.54
CHEMBL4462493 3 7.54
CHEMBL5935906 3 7.53
CHEMBL4542247 3 7.48
CHEMBL4448494 3 7.47
CHEMBL5872006 3 7.43
CHEMBL5873158 3 7.39
CHEMBL5911327 3 7.39
CHEMBL5865665 3 7.37
CHEMBL5853767 3 7.26
CHEMBL5774332 3 7.17
CHEMBL3301610 ABEMACICLIB 4.0 3 7.09
CHEMBL5976517 3 7.08
CHEMBL5897984 3 7.07
CHEMBL6007400 3 7.04
CHEMBL4455210 3 7.04
CHEMBL5869281 3 6.85
CHEMBL5994564 3 6.62
CHEMBL5755607 3 6.54

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5903034 IC50 = 3.9 nM 8.41
CHEMBL5938059 IC50 = 7.17 nM 8.14
CHEMBL6002674 IC50 = 8.37 nM 8.08
CHEMBL4466497 IC50 = 11.4 nM 7.94
CHEMBL5775091 IC50 = 14.6 nM 7.84
CHEMBL4550287 IC50 = 15.3 nM 7.82
CHEMBL5979966 IC50 = 15.6 nM 7.81
CHEMBL5950534 IC50 = 15.9 nM 7.80
CHEMBL5834090 IC50 = 21.4 nM 7.67
CHEMBL5964401 IC50 = 22.6 nM 7.65
CHEMBL5830076 IC50 = 28.0 nM 7.55
CHEMBL5933703 IC50 = 28.5 nM 7.54
CHEMBL4462493 IC50 = 29.0 nM 7.54
CHEMBL5935906 IC50 = 29.3 nM 7.53
CHEMBL4542247 IC50 = 33.3 nM 7.48
CHEMBL4448494 IC50 = 33.6 nM 7.47
CHEMBL5872006 IC50 = 37.0 nM 7.43
CHEMBL5911327 IC50 = 40.3 nM 7.39
CHEMBL5873158 IC50 = 41.0 nM 7.39
CHEMBL5865665 IC50 = 42.3 nM 7.37
CHEMBL5950534 IC50 = 47.2 nM 7.33
CHEMBL5853767 IC50 = 55.3 nM 7.26
CHEMBL5774332 IC50 = 67.3 nM 7.17
CHEMBL3301610 ABEMACICLIB IC50 = 81.8 nM 7.09
CHEMBL5976517 IC50 = 82.4 nM 7.08
CHEMBL5897984 IC50 = 85.8 nM 7.07
CHEMBL4455210 IC50 = 91.5 nM 7.04
CHEMBL6007400 IC50 = 91.2 nM 7.04
CHEMBL5869281 IC50 = 140.0 nM 6.85
CHEMBL5994564 IC50 = 239.0 nM 6.62
CHEMBL5755607 IC50 = 288.0 nM 6.54
CHEMBL5757213 IC50 = 620.0 nM 6.21
CHEMBL5834090 kon = - -
CHEMBL5853767 k_off = - s-1 -
CHEMBL5853767 kon = - -
CHEMBL5834090 k_off = - s-1 -
CHEMBL6002674 kon = - -
CHEMBL5775091 kon = - -
CHEMBL5933703 k_off = - s-1 -
CHEMBL5903034 kon = - -
CHEMBL5903034 k_off = - s-1 -
CHEMBL5933703 kon = - -
CHEMBL5950534 kon = - -
CHEMBL5775091 k_off = - s-1 -
CHEMBL5938059 k_off = - s-1 -
CHEMBL5950534 kon = - -
CHEMBL5950534 k_off = - s-1 -
CHEMBL5938059 kon = - -
CHEMBL6002674 k_off = - s-1 -
CHEMBL5950534 k_off = - s-1 -