Assay Detail
Binding
CHEMBL5736892
Review assay metadata, readout intent, target linkage, and publication context from the same page.
Biochemical Activity Assay: The PDC inactivation assay is performed in Greiner 384-well microtiter plates and is used for high throughput screen. 4 μl of PDHK2 (human, rec, Carna Bioscience, 10 ng/μl-137 nM final concentration) and PDC (isolated from porcine heart, Sigma-Aldrich, 20 mU/ml final concentration) are incubated in the absence or presence of the test compound (10 dilution concentrations) for 30 min at room temperature in kinase buffer (15 mM potassium phosphate buffer, pH 7.0, 60 mM KCl, 1.5 mM DTT, 2.5 mM MgCl2, 0.0125% (w/v) BSA, 0.125% Pluronic F-68). The kinase reaction is started by the addition of 4 μl ATP substrate solution (fc 5 μM in kinase buffer). After 30 min incubation at 37° C. 40 μl of PDC reaction solution (100 mM Tris/HCl, pH 7.8, 0.5 mM EDTA, 1 mM MgCl2, 50 mM NaF, 0.25 mM Coenzyme A, 5 mM pyruvate, 1 mM NAD, 5 mM DTT, 1 mM thiamine pyrophosphate) is added. The first fluorescence measurement is performed on a Perkin Elmer Envision (Exc 340 nm, Em 450 nm). The reaction is incubated for 45 min at room temperature. Afterwards a second fluorescence measurement is performed and the PDC activity is calculated by the difference between both measurements.
102
Total Activities
34
Compounds Tested
3
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Confidence | 8 — Homologous single protein target |
| Curated By | Autocuration |
Target
[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial (CHEMBL3861) ↗| Type | SINGLE PROTEIN |
| Organism | Homo sapiens |
Publication
Piperidinyl-propanone derivatives
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 34 | 6.09 | 7.12 |
| kon | 34 | - | - |
| k_off | 34 | - | - |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL5856417 | — | — | 3 | 7.12 |
| CHEMBL6011956 | — | — | 3 | 7.06 |
| CHEMBL5777543 | — | — | 3 | 7.05 |
| CHEMBL5988918 | — | — | 3 | 7.04 |
| CHEMBL5801470 | — | — | 3 | 7.00 |
| CHEMBL5833317 | — | — | 3 | 7.00 |
| CHEMBL5896437 | — | — | 3 | 6.89 |
| CHEMBL5966381 | — | — | 3 | 6.89 |
| CHEMBL5815931 | — | — | 3 | 6.82 |
| CHEMBL6056190 | — | — | 3 | 6.75 |
| CHEMBL5835287 | — | — | 3 | 6.75 |
| CHEMBL5758177 | — | — | 3 | 6.57 |
| CHEMBL5833356 | — | — | 3 | 6.50 |
| CHEMBL6019143 | — | — | 3 | 6.43 |
| CHEMBL6037498 | — | — | 3 | 6.40 |
| CHEMBL5783218 | — | — | 3 | 6.36 |
| CHEMBL6037496 | — | — | 3 | 6.31 |
| CHEMBL5935508 | — | — | 3 | 6.30 |
| CHEMBL6062972 | — | — | 3 | 6.23 |
| CHEMBL5995031 | — | — | 3 | 6.14 |
| CHEMBL5902489 | — | — | 3 | 5.85 |
| CHEMBL5985466 | — | — | 3 | 5.72 |
| CHEMBL5800318 | — | — | 3 | 5.62 |
| CHEMBL5752953 | — | — | 3 | 5.58 |
| CHEMBL5876553 | — | — | 3 | 5.46 |
| CHEMBL5985651 | — | — | 3 | 5.31 |
| CHEMBL5820006 | — | — | 3 | 5.22 |
| CHEMBL5949729 | — | — | 3 | 5.18 |
| CHEMBL5904298 | — | — | 3 | 5.14 |
| CHEMBL5855406 | — | — | 3 | 5.09 |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL5856417 | — | IC50 | = | 75.0 | nM | 7.12 |
| CHEMBL6011956 | — | IC50 | = | 88.0 | nM | 7.06 |
| CHEMBL5777543 | — | IC50 | = | 90.0 | nM | 7.05 |
| CHEMBL5988918 | — | IC50 | = | 91.0 | nM | 7.04 |
| CHEMBL5833317 | — | IC50 | = | 100.0 | nM | 7.00 |
| CHEMBL5801470 | — | IC50 | = | 100.0 | nM | 7.00 |
| CHEMBL5966381 | — | IC50 | = | 130.0 | nM | 6.89 |
| CHEMBL5896437 | — | IC50 | = | 130.0 | nM | 6.89 |
| CHEMBL5815931 | — | IC50 | = | 150.0 | nM | 6.82 |
| CHEMBL6056190 | — | IC50 | = | 180.0 | nM | 6.75 |
| CHEMBL5835287 | — | IC50 | = | 180.0 | nM | 6.75 |
| CHEMBL5758177 | — | IC50 | = | 270.0 | nM | 6.57 |
| CHEMBL5833356 | — | IC50 | = | 320.0 | nM | 6.50 |
| CHEMBL6019143 | — | IC50 | = | 370.0 | nM | 6.43 |
| CHEMBL6037498 | — | IC50 | = | 400.0 | nM | 6.40 |
| CHEMBL5783218 | — | IC50 | = | 440.0 | nM | 6.36 |
| CHEMBL6037496 | — | IC50 | = | 490.0 | nM | 6.31 |
| CHEMBL5935508 | — | IC50 | = | 500.0 | nM | 6.30 |
| CHEMBL6062972 | — | IC50 | = | 590.0 | nM | 6.23 |
| CHEMBL5995031 | — | IC50 | = | 720.0 | nM | 6.14 |
| CHEMBL5902489 | — | IC50 | = | 1400.0 | nM | 5.85 |
| CHEMBL5985466 | — | IC50 | = | 1900.0 | nM | 5.72 |
| CHEMBL5800318 | — | IC50 | = | 2400.0 | nM | 5.62 |
| CHEMBL5752953 | — | IC50 | = | 2600.0 | nM | 5.58 |
| CHEMBL5876553 | — | IC50 | = | 3500.0 | nM | 5.46 |
| CHEMBL5985651 | — | IC50 | = | 4900.0 | nM | 5.31 |
| CHEMBL5820006 | — | IC50 | = | 6000.0 | nM | 5.22 |
| CHEMBL5949729 | — | IC50 | = | 6600.0 | nM | 5.18 |
| CHEMBL5904298 | — | IC50 | = | 7300.0 | nM | 5.14 |
| CHEMBL5855406 | — | IC50 | = | 8200.0 | nM | 5.09 |
| CHEMBL5951048 | — | IC50 | = | 11000.0 | nM | 4.96 |
| CHEMBL5904670 | — | IC50 | = | 13000.0 | nM | 4.89 |
| CHEMBL5857720 | — | IC50 | = | 18000.0 | nM | 4.75 |
| CHEMBL5903608 | — | IC50 | = | 29000.0 | nM | 4.54 |
| CHEMBL5857720 | — | k_off | = | - | s-1 | - |
| CHEMBL5988918 | — | kon | = | - | — | - |
| CHEMBL5857720 | — | kon | = | - | — | - |
| CHEMBL5855406 | — | k_off | = | - | s-1 | - |
| CHEMBL5903608 | — | kon | = | - | — | - |
| CHEMBL5904670 | — | k_off | = | - | s-1 | - |
| CHEMBL5903608 | — | k_off | = | - | s-1 | - |
| CHEMBL5904670 | — | kon | = | - | — | - |
| CHEMBL5896437 | — | kon | = | - | — | - |
| CHEMBL5833317 | — | k_off | = | - | s-1 | - |
| CHEMBL5833317 | — | kon | = | - | — | - |
| CHEMBL5801470 | — | kon | = | - | — | - |
| CHEMBL5801470 | — | k_off | = | - | s-1 | - |
| CHEMBL5904298 | — | k_off | = | - | s-1 | - |
| CHEMBL5835287 | — | kon | = | - | — | - |
| CHEMBL5896437 | — | k_off | = | - | s-1 | - |