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Assay Detail

CHEMBL5736892

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Binding
Biochemical Activity Assay: The PDC inactivation assay is performed in Greiner 384-well microtiter plates and is used for high throughput screen. 4 μl of PDHK2 (human, rec, Carna Bioscience, 10 ng/μl-137 nM final concentration) and PDC (isolated from porcine heart, Sigma-Aldrich, 20 mU/ml final concentration) are incubated in the absence or presence of the test compound (10 dilution concentrations) for 30 min at room temperature in kinase buffer (15 mM potassium phosphate buffer, pH 7.0, 60 mM KCl, 1.5 mM DTT, 2.5 mM MgCl2, 0.0125% (w/v) BSA, 0.125% Pluronic F-68). The kinase reaction is started by the addition of 4 μl ATP substrate solution (fc 5 μM in kinase buffer). After 30 min incubation at 37° C. 40 μl of PDC reaction solution (100 mM Tris/HCl, pH 7.8, 0.5 mM EDTA, 1 mM MgCl2, 50 mM NaF, 0.25 mM Coenzyme A, 5 mM pyruvate, 1 mM NAD, 5 mM DTT, 1 mM thiamine pyrophosphate) is added. The first fluorescence measurement is performed on a Perkin Elmer Envision (Exc 340 nm, Em 450 nm). The reaction is incubated for 45 min at room temperature. Afterwards a second fluorescence measurement is performed and the PDC activity is calculated by the difference between both measurements.
102
Total Activities
34
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Publication

Piperidinyl-propanone derivatives
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 34 6.09 7.12
kon 34 - -
k_off 34 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5856417 3 7.12
CHEMBL6011956 3 7.06
CHEMBL5777543 3 7.05
CHEMBL5988918 3 7.04
CHEMBL5801470 3 7.00
CHEMBL5833317 3 7.00
CHEMBL5896437 3 6.89
CHEMBL5966381 3 6.89
CHEMBL5815931 3 6.82
CHEMBL6056190 3 6.75
CHEMBL5835287 3 6.75
CHEMBL5758177 3 6.57
CHEMBL5833356 3 6.50
CHEMBL6019143 3 6.43
CHEMBL6037498 3 6.40
CHEMBL5783218 3 6.36
CHEMBL6037496 3 6.31
CHEMBL5935508 3 6.30
CHEMBL6062972 3 6.23
CHEMBL5995031 3 6.14
CHEMBL5902489 3 5.85
CHEMBL5985466 3 5.72
CHEMBL5800318 3 5.62
CHEMBL5752953 3 5.58
CHEMBL5876553 3 5.46
CHEMBL5985651 3 5.31
CHEMBL5820006 3 5.22
CHEMBL5949729 3 5.18
CHEMBL5904298 3 5.14
CHEMBL5855406 3 5.09

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5856417 IC50 = 75.0 nM 7.12
CHEMBL6011956 IC50 = 88.0 nM 7.06
CHEMBL5777543 IC50 = 90.0 nM 7.05
CHEMBL5988918 IC50 = 91.0 nM 7.04
CHEMBL5833317 IC50 = 100.0 nM 7.00
CHEMBL5801470 IC50 = 100.0 nM 7.00
CHEMBL5966381 IC50 = 130.0 nM 6.89
CHEMBL5896437 IC50 = 130.0 nM 6.89
CHEMBL5815931 IC50 = 150.0 nM 6.82
CHEMBL6056190 IC50 = 180.0 nM 6.75
CHEMBL5835287 IC50 = 180.0 nM 6.75
CHEMBL5758177 IC50 = 270.0 nM 6.57
CHEMBL5833356 IC50 = 320.0 nM 6.50
CHEMBL6019143 IC50 = 370.0 nM 6.43
CHEMBL6037498 IC50 = 400.0 nM 6.40
CHEMBL5783218 IC50 = 440.0 nM 6.36
CHEMBL6037496 IC50 = 490.0 nM 6.31
CHEMBL5935508 IC50 = 500.0 nM 6.30
CHEMBL6062972 IC50 = 590.0 nM 6.23
CHEMBL5995031 IC50 = 720.0 nM 6.14
CHEMBL5902489 IC50 = 1400.0 nM 5.85
CHEMBL5985466 IC50 = 1900.0 nM 5.72
CHEMBL5800318 IC50 = 2400.0 nM 5.62
CHEMBL5752953 IC50 = 2600.0 nM 5.58
CHEMBL5876553 IC50 = 3500.0 nM 5.46
CHEMBL5985651 IC50 = 4900.0 nM 5.31
CHEMBL5820006 IC50 = 6000.0 nM 5.22
CHEMBL5949729 IC50 = 6600.0 nM 5.18
CHEMBL5904298 IC50 = 7300.0 nM 5.14
CHEMBL5855406 IC50 = 8200.0 nM 5.09
CHEMBL5951048 IC50 = 11000.0 nM 4.96
CHEMBL5904670 IC50 = 13000.0 nM 4.89
CHEMBL5857720 IC50 = 18000.0 nM 4.75
CHEMBL5903608 IC50 = 29000.0 nM 4.54
CHEMBL5857720 k_off = - s-1 -
CHEMBL5988918 kon = - -
CHEMBL5857720 kon = - -
CHEMBL5855406 k_off = - s-1 -
CHEMBL5903608 kon = - -
CHEMBL5904670 k_off = - s-1 -
CHEMBL5903608 k_off = - s-1 -
CHEMBL5904670 kon = - -
CHEMBL5896437 kon = - -
CHEMBL5833317 k_off = - s-1 -
CHEMBL5833317 kon = - -
CHEMBL5801470 kon = - -
CHEMBL5801470 k_off = - s-1 -
CHEMBL5904298 k_off = - s-1 -
CHEMBL5835287 kon = - -
CHEMBL5896437 k_off = - s-1 -