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Assay Detail

CHEMBL5737562

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Binding
Sodium Influx Assay (In Vitro Assay): This sodium influx assay employs the use of the cell permeable, sodium sensitive dye ANG2 to quantify sodium ion influx through sodium channels which are maintained in an open state by use of sodium channel modulators. This high throughput sodium influx assay allows for rapid profiling and characterization of sodium channel blockers.In general, Trex HEK293 cells were stably transfected with an inducible expression vector containing the full-length cDNA coding for the desired human sodium channel α-subunit and with an expression vector containing full length cDNA coding for the β1-subunit. Sodium channel expressing cell lines were induced with tetracycline (1 μg/mL) and plated on 384-well PDL-coated plates at a density of 25K-30K cells/well in culture media (DMEM, containing 10% FBS and 1% L-glutamine). After overnight incubation (37° C., 5% CO2), culture media was removed and cells were loaded with 5 uM ANG2 dye for 1-1.5 h in Buffer 1 (155 mM NMDG, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, 10 mM HEPES, 10 mM glucose, adjusted with Tris to pH 7.4). Access dye was removed and cells were incubated with test compounds for 1 hr in buffer 1 containing sodium channel modulator(s) at room temperature. Hamamatsu FDSS μCell was used to perform a 1:1 addition of Na/K challenge buffer (140 mM NaCl, 20 mM HEPES, 1 mM CaCl2, 15 mM KCl, 1 mM MgCl2, 10 mM glucose, adjusted with Tris to pH 7.4) and simultaneously read plates at excitation wavelength of 530 nm and emission wavelength set at 558 nm. Percent inhibition of sodium ion influx was calculated for each test compound at each test concentration to determine the IC50 values.
1014
Total Activities
333
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Sodium channel protein type 8 subunit alpha (CHEMBL5202)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Benzenesulfonamide compouds and their use as therapeutic agents
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 338 6.29 9.00
kon 338 - -
k_off 338 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL6011164 3 9.00
CHEMBL5742330 3 8.52
CHEMBL5844365 3 8.15
CHEMBL5860643 3 8.10
CHEMBL5856264 3 8.00
CHEMBL6036218 6 7.96
CHEMBL6042352 3 7.85
CHEMBL6025042 3 7.82
CHEMBL5816584 3 7.80
CHEMBL5787113 3 7.72
CHEMBL5953924 3 7.68
CHEMBL5748509 3 7.68
CHEMBL5971030 3 7.64
CHEMBL5953595 3 7.60
CHEMBL5956982 3 7.54
CHEMBL5764406 3 7.54
CHEMBL5763802 3 7.50
CHEMBL6012186 3 7.46
CHEMBL5817529 3 7.46
CHEMBL6000640 3 7.44
CHEMBL5984269 3 7.44
CHEMBL5974273 3 7.34
CHEMBL5858421 3 7.31
CHEMBL5918008 3 7.30
CHEMBL6009838 3 7.26
CHEMBL6028512 3 7.24
CHEMBL5982575 9 7.19
CHEMBL5784789 3 7.19
CHEMBL5876162 3 7.16
CHEMBL5884546 3 7.16

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL6011164 IC50 = 1.0 nM 9.00
CHEMBL5742330 IC50 = 3.0 nM 8.52
CHEMBL5844365 IC50 = 7.0 nM 8.15
CHEMBL5860643 IC50 = 8.0 nM 8.10
CHEMBL5856264 IC50 = 10.0 nM 8.00
CHEMBL6036218 IC50 = 11.0 nM 7.96
CHEMBL6042352 IC50 = 14.0 nM 7.85
CHEMBL6025042 IC50 = 15.0 nM 7.82
CHEMBL5816584 IC50 = 16.0 nM 7.80
CHEMBL5787113 IC50 = 19.0 nM 7.72
CHEMBL5748509 IC50 = 21.0 nM 7.68
CHEMBL5953924 IC50 = 21.0 nM 7.68
CHEMBL5971030 IC50 = 23.0 nM 7.64
CHEMBL5953595 IC50 = 25.0 nM 7.60
CHEMBL5956982 IC50 = 29.0 nM 7.54
CHEMBL5764406 IC50 = 29.0 nM 7.54
CHEMBL5763802 IC50 = 32.0 nM 7.50
CHEMBL6012186 IC50 = 35.0 nM 7.46
CHEMBL5817529 IC50 = 35.0 nM 7.46
CHEMBL6000640 IC50 = 36.0 nM 7.44
CHEMBL5984269 IC50 = 36.0 nM 7.44
CHEMBL5974273 IC50 = 46.0 nM 7.34
CHEMBL5858421 IC50 = 49.0 nM 7.31
CHEMBL5918008 IC50 = 50.0 nM 7.30
CHEMBL6009838 IC50 = 55.0 nM 7.26
CHEMBL6028512 IC50 = 57.0 nM 7.24
CHEMBL5982575 IC50 = 64.0 nM 7.19
CHEMBL5784789 IC50 = 65.0 nM 7.19
CHEMBL5876162 IC50 = 69.0 nM 7.16
CHEMBL5884546 IC50 = 70.0 nM 7.16
CHEMBL5902754 IC50 = 72.0 nM 7.14
CHEMBL5979941 IC50 = 78.0 nM 7.11
CHEMBL6060422 IC50 = 80.0 nM 7.10
CHEMBL5906098 IC50 = 84.0 nM 7.08
CHEMBL5952727 IC50 = 85.0 nM 7.07
CHEMBL5756729 IC50 = 89.0 nM 7.05
CHEMBL5751008 IC50 = 92.0 nM 7.04
CHEMBL4435054 IC50 = 92.0 nM 7.04
CHEMBL5856648 IC50 = 91.0 nM 7.04
CHEMBL5818306 IC50 = 101.0 nM 7.00
CHEMBL5831980 IC50 = 108.0 nM 6.97
CHEMBL5927344 IC50 = 107.0 nM 6.97
CHEMBL5824011 IC50 = 107.0 nM 6.97
CHEMBL5974105 IC50 = 114.0 nM 6.94
CHEMBL5811440 IC50 = 114.0 nM 6.94
CHEMBL5924319 IC50 = 117.0 nM 6.93
CHEMBL6044605 IC50 = 120.0 nM 6.92
CHEMBL5886921 IC50 = 120.0 nM 6.92
CHEMBL6050574 IC50 = 123.0 nM 6.91
CHEMBL5967041 IC50 = 125.0 nM 6.90