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Assay Detail

CHEMBL5738150

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Binding
TR-FRET Assay for LSD1: LSD1 enzyme was produced in house. Tranylcypromine (TCP), LSD1 inhibitor was procured from Selleckchem. LSD1 enzyme, TCP and Biotinylated peptide substrate were diluted in assay buffer just before use. 2× inhibitor (10 μl, diluted in assay buffer) or Assay Buffer, and 5 nMenzyme were added to a 96 well plate and incubated at room temperature for 30 min. 5 μL of biotinylated Histone H3K4me1 peptide (4×) was added to each well and incubated at room temperature (RT) for 1 hour. Stop Solution containing 300 μM tranylcypromine in 1× LANCE Detection Buffer was added to the wells and incubated for 5 min at RT. Then, Detection mix containing 2 nM Eu-Ab and 50 nM ULight-Streptavidin in 1× LANCE Detection Buffer was prepared and added to the reaction mix. This mixture was incubated for 1 hour at room temperature. Readings were taken with the Pherastar Reader in TR-FRET mode (excitation at 337 nm & emission at A-665 nm, B-620 nM).
474
Total Activities
158
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Lysine-specific histone demethylase 1A (CHEMBL6136)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Cyclopropyl-amide compounds as dual LSD1/HDAC inhibitors
(2022)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 158 7.20 8.70
kon 158 - -
k_off 158 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5996359 3 8.70
CHEMBL5966500 3 8.70
CHEMBL6015631 3 8.40
CHEMBL5781882 3 8.40
CHEMBL5938169 3 8.30
CHEMBL5906062 3 8.30
CHEMBL5992079 3 8.22
CHEMBL6052887 3 8.22
CHEMBL5948833 3 8.22
CHEMBL6043258 3 8.22
CHEMBL5909583 3 8.15
CHEMBL6009347 3 7.96
CHEMBL5980383 3 7.92
CHEMBL5913333 3 7.92
CHEMBL6060437 3 7.89
CHEMBL5765347 3 7.82
CHEMBL5760901 3 7.80
CHEMBL5940634 3 7.80
CHEMBL5782679 3 7.75
CHEMBL5849555 3 7.75
CHEMBL5920225 3 7.72
CHEMBL5830367 3 7.72
CHEMBL5918285 3 7.72
CHEMBL5943726 3 7.72
CHEMBL5763750 3 7.70
CHEMBL6030241 3 7.70
CHEMBL5757880 3 7.70
CHEMBL5845442 3 7.68
CHEMBL5966340 3 7.68
CHEMBL5857545 3 7.68

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5996359 IC50 = 2.0 nM 8.70
CHEMBL5966500 IC50 = 2.0 nM 8.70
CHEMBL6015631 IC50 = 4.0 nM 8.40
CHEMBL5781882 IC50 = 4.0 nM 8.40
CHEMBL5906062 IC50 = 5.0 nM 8.30
CHEMBL5938169 IC50 = 5.0 nM 8.30
CHEMBL5948833 IC50 = 6.0 nM 8.22
CHEMBL6052887 IC50 = 6.0 nM 8.22
CHEMBL6043258 IC50 = 6.0 nM 8.22
CHEMBL5992079 IC50 = 6.0 nM 8.22
CHEMBL5909583 IC50 = 7.0 nM 8.15
CHEMBL6009347 IC50 = 11.0 nM 7.96
CHEMBL5980383 IC50 = 12.0 nM 7.92
CHEMBL5913333 IC50 = 12.0 nM 7.92
CHEMBL6060437 IC50 = 13.0 nM 7.89
CHEMBL5765347 IC50 = 15.0 nM 7.82
CHEMBL5940634 IC50 = 16.0 nM 7.80
CHEMBL5760901 IC50 = 16.0 nM 7.80
CHEMBL5782679 IC50 = 18.0 nM 7.75
CHEMBL5849555 IC50 = 18.0 nM 7.75
CHEMBL5920225 IC50 = 19.0 nM 7.72
CHEMBL5918285 IC50 = 19.0 nM 7.72
CHEMBL5830367 IC50 = 19.0 nM 7.72
CHEMBL5943726 IC50 = 19.0 nM 7.72
CHEMBL5757880 IC50 = 20.0 nM 7.70
CHEMBL5763750 IC50 = 20.0 nM 7.70
CHEMBL6030241 IC50 = 20.0 nM 7.70
CHEMBL5845442 IC50 = 21.0 nM 7.68
CHEMBL5966340 IC50 = 21.0 nM 7.68
CHEMBL5883145 IC50 = 21.0 nM 7.68
CHEMBL5971828 IC50 = 21.0 nM 7.68
CHEMBL5857545 IC50 = 21.0 nM 7.68
CHEMBL6045951 IC50 = 22.0 nM 7.66
CHEMBL5894681 IC50 = 22.0 nM 7.66
CHEMBL6057301 IC50 = 22.0 nM 7.66
CHEMBL6024231 IC50 = 22.0 nM 7.66
CHEMBL6006700 IC50 = 22.0 nM 7.66
CHEMBL6051283 IC50 = 22.0 nM 7.66
CHEMBL5976242 IC50 = 23.0 nM 7.64
CHEMBL4169910 IC50 = 23.0 nM 7.64
CHEMBL5767967 IC50 = 23.0 nM 7.64
CHEMBL5800201 IC50 = 24.0 nM 7.62
CHEMBL5844098 IC50 = 24.0 nM 7.62
CHEMBL5916224 IC50 = 24.0 nM 7.62
CHEMBL5824305 IC50 = 25.0 nM 7.60
CHEMBL5751050 IC50 = 25.0 nM 7.60
CHEMBL5953286 IC50 = 26.0 nM 7.58
CHEMBL5931141 IC50 = 26.0 nM 7.58
CHEMBL5775176 IC50 = 26.0 nM 7.58
CHEMBL5895534 IC50 = 26.0 nM 7.58