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Assay Detail

CHEMBL5738890

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Binding
Kinase Assay: Table 7 For most assays, kinase-tagged T7 phage strains were prepared in an E. coli host derived from the BL21 strain. E. coli were grown to log-phase and infected with T7 phage and incubated with shaking at 32° C. until lysis. The lysates were centrifuged and filtered to remove cell debris. The remaining kinases were produced in HEK-293 cells and subsequently tagged with DNA for qPCR detection. Streptavidin-coated magnetic beads were treated with biotinylated small molecule ligands for 30 minutes at room temperature to generate affinity resins for kinase assays. The liganded beads were blocked with excess biotin and washed with blocking buffer (SeaBlock (Pierce), 1% BSA, 0.05% Tween 20, 1 mM DTT) to remove unbound ligand and to reduce non-specific binding. Binding reactions were assembled by combining kinases, liganded affinity beads, and test compounds in 1x binding buffer (20% SeaBlock, 0.17xPBS, 0.05% Tween 20, 6 mM DTT). All reactions were performed in polystyrene 96-well plates in a final volume of 0.135 ml. The assay plates were incubated at room temperature with shaking for 1 hour and the affinity beads were washed with wash buffer (1xPBS, 0.05% Tween 20). The beads were then re-suspended in elution buffer (1xPBS, 0.05% Tween 20, 0.5 uM non-biotinylated affinity ligand) and incubated at room temperature with shaking for 30 minutes. The kinase concentration in the eluates was measured by qPCR.
15
Total Activities
5
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Receptor-type tyrosine-protein kinase FLT3 (CHEMBL1974)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Substituted Imidazo[1,2-a]-pyridines as IRAK 1/4 and FLT3 inhibitors
(2023)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
Kd 5 9.25 9.62
kon 5 - -
k_off 5 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL6002371 3 9.62
CHEMBL5927784 3 9.48
CHEMBL2105728 CRENOLANIB 3.0 3 9.41
CHEMBL256961 3 8.92
CHEMBL576982 QUIZARTINIB 4.0 3 8.82

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL6002371 Kd = 0.24 nM 9.62
CHEMBL5927784 Kd = 0.33 nM 9.48
CHEMBL2105728 CRENOLANIB Kd = 0.39 nM 9.41
CHEMBL256961 Kd = 1.2 nM 8.92
CHEMBL576982 QUIZARTINIB Kd = 1.5 nM 8.82
CHEMBL576982 QUIZARTINIB kon = - -
CHEMBL576982 QUIZARTINIB k_off = - s-1 -
CHEMBL256961 kon = - -
CHEMBL256961 k_off = - s-1 -
CHEMBL2105728 CRENOLANIB kon = - -
CHEMBL2105728 CRENOLANIB k_off = - s-1 -
CHEMBL6002371 kon = - -
CHEMBL6002371 k_off = - s-1 -
CHEMBL5927784 kon = - -
CHEMBL5927784 k_off = - s-1 -