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Assay Detail

CHEMBL5739515

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Binding
Biological Assay: In vitro characterization of biological activity of the examples was conducted on synthetically prepared samples of the phosphorylated compounds. S1P1Binding Assay: Membranes were prepared from CHO cells expressing human S1P1. Cells pellets (1×109 cells/pellet) were suspended in buffer containing 20 mM HEPES (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid), pH 7.5, 50 mM NaCl, 2 mM EDTA (Ethylenediaminetetraacetic acid) and Protease Inhibitor cocktail (Roche), and disrupted on ice using the Polytron homogenizer. The homogenate was centrifuged at 20,000 rpm (48,000 g) and the supernatant was discarded. The membrane pellets were resuspended in buffer containing 50 mM HEPES, pH 7.5, 100 mM NaCl, 1 mM MgCl2, 2 mM EDTA and stored in aliquots at −80° C. after protein concentration determination. Membranes (2 μg/well) and 0.03 nM final concentration of 33P-S1P ligand (1 mCi/ml, Perkin elmer or American Radiolabeled Chemicals) diluted in assay buffer (50 mM HEPES, pH7.4, 5 mM MgCl2, 1 mM CaCl2), 0.5% fatty acid free BSA (bovine serum albumin), 1 mM NaF) were added to the compound plates (384 Falcon v-bottom plate (0.5 l/well in a 11 point, 3-fold dilution). Binding was performed for 45 minutes at room temperature, terminated by collecting the membranes onto 384-well Millipore FB filter plates, and radioactivity was measured by TOPCOUNT®. The competition data of the test compounds over a range of concentrations was plotted as percentage inhibition of radioligand specific binding. The IC50 is defined as the concentration of competing ligand needed to reduce specific binding by 50%.
27
Total Activities
9
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Sphingosine 1-phosphate receptor 1 (CHEMBL4333)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Substituted bicyclic compounds
(2023)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 9 7.68 8.77
kon 9 - -
k_off 9 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5971641 3 8.77
CHEMBL5910640 3 8.64
CHEMBL5806105 3 8.52
CHEMBL5973530 3 8.28
CHEMBL5795098 3 7.31
CHEMBL5756629 3 7.16
CHEMBL5974391 3 6.92
CHEMBL5746820 3 6.82
CHEMBL5962194 3 6.74

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5971641 IC50 = 1.7 nM 8.77
CHEMBL5910640 IC50 = 2.3 nM 8.64
CHEMBL5806105 IC50 = 3.0 nM 8.52
CHEMBL5973530 IC50 = 5.2 nM 8.28
CHEMBL5795098 IC50 = 48.7 nM 7.31
CHEMBL5756629 IC50 = 69.4 nM 7.16
CHEMBL5974391 IC50 = 119.0 nM 6.92
CHEMBL5746820 IC50 = 151.0 nM 6.82
CHEMBL5962194 IC50 = 183.0 nM 6.74
CHEMBL5971641 kon = - -
CHEMBL5971641 k_off = - s-1 -
CHEMBL5806105 kon = - -
CHEMBL5806105 k_off = - s-1 -
CHEMBL5910640 kon = - -
CHEMBL5910640 k_off = - s-1 -
CHEMBL5973530 kon = - -
CHEMBL5973530 k_off = - s-1 -
CHEMBL5974391 k_off = - s-1 -
CHEMBL5756629 kon = - -
CHEMBL5746820 k_off = - s-1 -
CHEMBL5746820 kon = - -
CHEMBL5795098 k_off = - s-1 -
CHEMBL5795098 kon = - -
CHEMBL5962194 k_off = - s-1 -
CHEMBL5962194 kon = - -
CHEMBL5974391 kon = - -
CHEMBL5756629 k_off = - s-1 -