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Assay Detail

CHEMBL3776326

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Inhibition of N-terminal His6-tagged KDM4C (1 to 352 residues) (unknown origin) expressed in Escherichia coli Rosetta 2(DE3)pLysS using biotinylated histone H3 (1 to 21 residues) lysine 9 trimethylated peptide/50 uM alpha-ketoglutarate as substrate/cofactor measured after 45 mins by TR-FRET assay
15
Total Activities
15
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Lysine-specific demethylase 4C (CHEMBL6175)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Docking and Linking of Fragments To Discover Jumonji Histone Demethylase Inhibitors.
Korczynska M, Le DD, Younger N, Gregori-Puigjané E, Tumber A, Krojer T, Velupillai S, Gileadi C, Nowak RP, Iwasa E, Pollock SB, Ortiz Torres I, Oppermann U, Shoichet BK, Fujimori DG.
J Med Chem (2016) 59 : 1580 -1598
PubMed 26699912 · DOI

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 15 5.24 5.82

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3775272 1 5.82
CHEMBL3775262 1 5.58
CHEMBL3775162 1 5.47
CHEMBL3775563 1 5.43
CHEMBL3775867 1 5.30
CHEMBL3775380 1 5.13
CHEMBL3774814 1 4.77
CHEMBL3774598 1 4.40
CHEMBL3775869 1 -
CHEMBL3774480 1 -
CHEMBL3775495 1 -
CHEMBL3774513 1 -
CHEMBL3774611 1 -
CHEMBL3775759 1 -
CHEMBL3774693 1 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3775272 IC50 = 1500.0 nM 5.82
CHEMBL3775262 IC50 = 2600.0 nM 5.58
CHEMBL3775162 IC50 = 3400.0 nM 5.47
CHEMBL3775563 IC50 = 3700.0 nM 5.43
CHEMBL3775867 IC50 = 5000.0 nM 5.30
CHEMBL3775380 IC50 = 7400.0 nM 5.13
CHEMBL3774814 IC50 = 17000.0 nM 4.77
CHEMBL3774598 IC50 = 40000.0 nM 4.40
CHEMBL3775869 IC50 - -
CHEMBL3774480 IC50 - -
CHEMBL3775495 IC50 - -
CHEMBL3774513 IC50 - -
CHEMBL3774611 IC50 - -
CHEMBL3775759 IC50 - -
CHEMBL3774693 IC50 - -