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Assay Detail

CHEMBL3887663

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Binding
In Vitro Fluorescence Assay: A continuous assay is used in which the substrate is a synthetic peptide containing a fluorescent group (7-methoxycoumarin, Mca), which is quenched by energy transfer to a 2,4-dinitrophenyl group. The substrate is the peptide Mca-PQGL-(3-[2,4-dinitrophenyl]-L-2,3-diaminopropionyl)-AR-OH. When the peptide is cleaved by MMP a large increase in fluorescence is observed. The source of the enzyme for this assay is full-length, recombinant, human pro-MMP-2 expressed in Chinese Hamster Ovary (CHO) cells that is subsequently activated by an organomercurial compound, 4-aminophenyl mercuric acetate (APMA). APMA is removed through a desalting column (MMP-2 Calbiochem catalog number PF023). The assay buffer consists of 100 mM Tris-HCl (pH 7.5), 100 mM NaCl, 10 mM CaCl2 and 10 uM human serum albumin Each well of the 96-well plates consists of a 100 uL reaction mixture consisting of assay buffer, MMP (final concentration of 0.2 nM, prepared by diluting in assay buffer).
5
Total Activities
5
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

72 kDa type IV collagenase (CHEMBL333)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Aggrecanase inhibitors
(2015)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 5 5.43 6.15

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL4072836 1 6.15
CHEMBL4066965 1 5.76
CHEMBL3972836 1 5.33
CHEMBL3980860 1 4.46
CHEMBL3955404 1 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL4072836 IC50 = 704.0 nM 6.15
CHEMBL4066965 IC50 = 1750.0 nM 5.76
CHEMBL3972836 IC50 = 4652.0 nM 5.33
CHEMBL3980860 IC50 = 35000.0 nM 4.46
CHEMBL3955404 IC50 > 100000.0 nM -