Assay Detail
Binding
CHEMBL3887664
Review assay metadata, readout intent, target linkage, and publication context from the same page.
In Vitro Fluorescence Assay: A continuous assay is used in which the substrate is a synthetic peptide containing a fluorescent group (7-methoxycoumarin, Mca), which is quenched by energy transfer to a 2,4-dinitrophenyl group. The substrate is the peptide Mca-PQGL-(3-[2,4-dinitrophenyl]-L-2,3-diaminopropionyl)-AR-OH. When the peptide is cleaved by MMP a large increase in fluorescence is observed. The source of the enzyme for this assay is full-length, recombinant, human pro-MMP-2 expressed in Chinese Hamster Ovary (CHO) cells that is subsequently activated by an organomercurial compound, 4-aminophenyl mercuric acetate (APMA). APMA is removed through a desalting column (MMP-2 Calbiochem catalog number PF023). The assay buffer consists of 100 mM Tris-HCl (pH 7.5), 100 mM NaCl, 10 mM CaCl2 and 10 uM human serum albumin Each well of the 96-well plates consists of a 100 uL reaction mixture consisting of assay buffer, MMP (final concentration of 0.2 nM, prepared by diluting in assay buffer).
5
Total Activities
5
Compounds Tested
1
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Confidence | 8 — Homologous single protein target |
| Curated By | Autocuration |
Publication
Aggrecanase inhibitors
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 5 | 4.81 | 5.55 |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL4066965 | — | — | 1 | 5.55 |
| CHEMBL3972836 | — | — | 1 | 4.88 |
| CHEMBL4072836 | — | — | 1 | 4.81 |
| CHEMBL3980860 | — | — | 1 | 4.00 |
| CHEMBL3955404 | — | — | 1 | - |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL4066965 | — | IC50 | = | 2845.0 | nM | 5.55 |
| CHEMBL3972836 | — | IC50 | = | 13165.0 | nM | 4.88 |
| CHEMBL4072836 | — | IC50 | = | 15342.0 | nM | 4.81 |
| CHEMBL3980860 | — | IC50 | = | 99710.0 | nM | 4.00 |
| CHEMBL3955404 | — | IC50 | > | 100000.0 | nM | - |