Assay Detail
Binding
CHEMBL3887699
Review assay metadata, readout intent, target linkage, and publication context from the same page.
Inhibition Assay: A rapid plate DNA synthesis assay was performed using optimized conditions. Briefly, a 1.2:1 ratio of a 20-mer oligonucleotide primer (5′-GCGAATGAATGACCGCTGAC-3′, SEQ ID No. 1) and a 5′-end biotinylated 100-mer oligonucleotide template (5′-Biotin-AGCACTATTGACATTACAGAGTCGCCTTGGCTCTCTGGCTGTTCGTTGCGGGCTCCGCG TGCGTTGGCTTCGGTCGTCCCGTCAGCGGTCATTCATTGGC-3′) were annealed and loaded into a 96-well microtiter streptavidin-coated plate (Streptawell plates, Roche Applied Science, Indianapolis, Ind., USA) at 5 pmol/well. The wells were incubated at 37 C for 90 min, and washed with 100 L PBS. The reaction was conducted in low salt buffer (20 mM Tris-HCl pH 7.4, 3 mM MgCl2, 0.1 mM EDTA, 0.5 mM DTT, 2% glycerol, 40 ug/mL BSA, 5 uM dNTPs, 1 uM digoxigenin-11-2′-deoxyuridine-5′-triphosphate (DIG-dUTP, Roche Applied Science) with 1 μL vaccinia infected cell lysate or 1 uL of in vitro translated E9 DNA polymerase. The reaction plates were incubated at 37° C
35
Total Activities
35
Compounds Tested
1
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Confidence | 8 — Homologous single protein target |
| Curated By | Autocuration |
Target
DNA polymerase (CHEMBL3988586) ↗| Type | SINGLE PROTEIN |
| Organism | Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strainWR)) |
Publication
Therapeutic compounds for blocking DNA synthesis of POX viruses
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 35 | 5.06 | 6.30 |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL494487 | — | — | 1 | 6.30 |
| CHEMBL494691 | — | — | 1 | 5.89 |
| CHEMBL494692 | — | — | 1 | 5.52 |
| CHEMBL493889 | — | — | 1 | 5.46 |
| CHEMBL561169 | — | — | 1 | 5.42 |
| CHEMBL523191 | — | — | 1 | 5.40 |
| CHEMBL493863 | — | — | 1 | 5.39 |
| CHEMBL446815 | — | — | 1 | 5.30 |
| CHEMBL522887 | — | — | 1 | 5.28 |
| CHEMBL492418 | — | — | 1 | 5.27 |
| CHEMBL494668 | — | — | 1 | 5.23 |
| CHEMBL494669 | — | — | 1 | 5.22 |
| CHEMBL343732 | — | — | 1 | 5.20 |
| CHEMBL523359 | — | — | 1 | 5.17 |
| CHEMBL493866 | — | — | 1 | 5.14 |
| CHEMBL493435 | — | — | 1 | 5.13 |
| CHEMBL495496 | — | — | 1 | 5.13 |
| CHEMBL523375 | — | — | 1 | 5.00 |
| CHEMBL494474 | — | — | 1 | 5.00 |
| CHEMBL492467 | — | — | 1 | 4.92 |
| CHEMBL524172 | — | — | 1 | 4.58 |
| CHEMBL3963648 | — | — | 1 | 4.58 |
| CHEMBL500836 | — | — | 1 | 4.52 |
| CHEMBL504977 | — | — | 1 | 4.50 |
| CHEMBL494725 | — | — | 1 | 4.37 |
| CHEMBL494931 | — | — | 1 | 4.34 |
| CHEMBL492887 | — | — | 1 | 4.28 |
| CHEMBL522197 | — | — | 1 | 4.12 |
| CHEMBL445205 | — | — | 1 | - |
| CHEMBL526118 | — | — | 1 | - |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL494487 | — | IC50 | = | 500.0 | nM | 6.30 |
| CHEMBL494691 | — | IC50 | = | 1300.0 | nM | 5.89 |
| CHEMBL494692 | — | IC50 | = | 3000.0 | nM | 5.52 |
| CHEMBL493889 | — | IC50 | = | 3500.0 | nM | 5.46 |
| CHEMBL561169 | — | IC50 | = | 3800.0 | nM | 5.42 |
| CHEMBL523191 | — | IC50 | = | 4000.0 | nM | 5.40 |
| CHEMBL493863 | — | IC50 | = | 4100.0 | nM | 5.39 |
| CHEMBL446815 | — | IC50 | = | 5000.0 | nM | 5.30 |
| CHEMBL522887 | — | IC50 | = | 5300.0 | nM | 5.28 |
| CHEMBL492418 | — | IC50 | = | 5400.0 | nM | 5.27 |
| CHEMBL494668 | — | IC50 | = | 5900.0 | nM | 5.23 |
| CHEMBL494669 | — | IC50 | = | 6000.0 | nM | 5.22 |
| CHEMBL343732 | — | IC50 | = | 6300.0 | nM | 5.20 |
| CHEMBL523359 | — | IC50 | = | 6700.0 | nM | 5.17 |
| CHEMBL493866 | — | IC50 | = | 7300.0 | nM | 5.14 |
| CHEMBL493435 | — | IC50 | = | 7400.0 | nM | 5.13 |
| CHEMBL495496 | — | IC50 | = | 7400.0 | nM | 5.13 |
| CHEMBL523375 | — | IC50 | = | 10000.0 | nM | 5.00 |
| CHEMBL494474 | — | IC50 | = | 10000.0 | nM | 5.00 |
| CHEMBL492467 | — | IC50 | = | 12000.0 | nM | 4.92 |
| CHEMBL524172 | — | IC50 | = | 26000.0 | nM | 4.58 |
| CHEMBL3963648 | — | IC50 | = | 26000.0 | nM | 4.58 |
| CHEMBL500836 | — | IC50 | = | 30000.0 | nM | 4.52 |
| CHEMBL504977 | — | IC50 | = | 32000.0 | nM | 4.50 |
| CHEMBL494725 | — | IC50 | = | 43000.0 | nM | 4.37 |
| CHEMBL494931 | — | IC50 | = | 46000.0 | nM | 4.34 |
| CHEMBL492887 | — | IC50 | = | 52000.0 | nM | 4.28 |
| CHEMBL522197 | — | IC50 | = | 75000.0 | nM | 4.12 |
| CHEMBL445205 | — | IC50 | = | 239000.0 | nM | - |
| CHEMBL526118 | — | IC50 | = | 111000.0 | nM | - |
| CHEMBL492473 | — | IC50 | = | 188000.0 | nM | - |
| CHEMBL522832 | — | IC50 | = | 129000.0 | nM | - |
| CHEMBL492466 | — | IC50 | = | 131000.0 | nM | - |
| CHEMBL523663 | — | IC50 | = | 374000.0 | nM | - |
| CHEMBL492267 | — | IC50 | = | 108000.0 | nM | - |