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Assay Detail

CHEMBL3888286

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Binding
[3H]-Epibatidine Radioligand Binding Assay: Briefly, cultured cells at >80% confluence were removed from their flasks (80 cm^2) with a disposable cell scraper and placed in 10 mL of 50 mM Tris.HCl buffer (pH 7.4, 4 °C.). The cell suspension was centrifuged at 10,000×g for 5 min and the pellet was collected. The cell pellet was then homogenized in 10 mL buffer with a polytron homogenizer and centrifuged at 36,000 g for 10 min at 4 °C. The membrane pellet was resuspended in fresh buffer, and aliquots of the membrane preparation were used for binding assays. The concentration of [3H]-epibatidine used was ~500 pM for competition binding assays. Nonspecific binding was assessed in parallel incubations in the presence of 300 μM nicotine. Bound and free ligands were separated by vacuum filtration through Whatman GF/C filters treated with 0.5% polyethylenimine. The filter-retained radioactivity was measured by liquid scintillation counting. Specific binding was defined as the difference between total binding and nonspecific binding. Data from competition binding assays were analyzed using Prism 5 (GraphPad Software, San Diego, Calif.). The Kd values for [3H]-epibatidine used for calculating Ki values of nAChR subtypes were 0.02 nM for α2β2, 0.08 nM for α2β4, 0.03 nM for α3β2, 0.3 nM for α3β4, 0.04 nM for α4β2, 0.09 nM for α4β4, 1.8 nM for α7 and 0.05 for rat forebrain.
16
Total Activities
12
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 6 — Multiple protein complex / RNA
Curated By Autocuration

Target

Neuronal acetylcholine receptor; alpha4/beta2 (CHEMBL1907589)
Type PROTEIN COMPLEX
Organism Homo sapiens

Publication

2,5-disubstituted-pyridyl nicotinic ligands, and methods of use thereof
(2016)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
Ki 16 8.03 10.21

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL2024096 1 10.21
CHEMBL1076903 VARENICLINE 4.0 1 9.92
CHEMBL2323571 2 8.38
CHEMBL2323570 2 8.37
CHEMBL2323572 2 8.33
CHEMBL2323569 2 8.02
CHEMBL3 NICOTINE 4.0 1 8.00
CHEMBL2323566 1 7.92
CHEMBL2323568 1 7.14
CHEMBL2323565 1 6.13
CHEMBL2323567 1 5.00
CHEMBL2323573 1 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL2024096 Ki = 0.062 nM 10.21
CHEMBL1076903 VARENICLINE Ki = 0.12 nM 9.92
CHEMBL2323571 Ki = 4.2 nM 8.38
CHEMBL2323570 Ki = 4.3 nM 8.37
CHEMBL2323570 Ki = 4.3 nM 8.37
CHEMBL2323572 Ki = 4.7 nM 8.33
CHEMBL2323571 Ki = 5.1 nM 8.29
CHEMBL2323572 Ki = 5.3 nM 8.28
CHEMBL2323569 Ki = 9.6 nM 8.02
CHEMBL2323569 Ki = 9.6 nM 8.02
CHEMBL3 NICOTINE Ki = 10.0 nM 8.00
CHEMBL2323566 Ki = 12.0 nM 7.92
CHEMBL2323568 Ki = 73.0 nM 7.14
CHEMBL2323565 Ki = 740.0 nM 6.13
CHEMBL2323567 Ki = 9900.0 nM 5.00
CHEMBL2323573 Ki > 100000.0 nM -