Assay Detail
Binding
CHEMBL3888286
Review assay metadata, readout intent, target linkage, and publication context from the same page.
[3H]-Epibatidine Radioligand Binding Assay: Briefly, cultured cells at >80% confluence were removed from their flasks (80 cm^2) with a disposable cell scraper and placed in 10 mL of 50 mM Tris.HCl buffer (pH 7.4, 4 °C.). The cell suspension was centrifuged at 10,000×g for 5 min and the pellet was collected. The cell pellet was then homogenized in 10 mL buffer with a polytron homogenizer and centrifuged at 36,000 g for 10 min at 4 °C. The membrane pellet was resuspended in fresh buffer, and aliquots of the membrane preparation were used for binding assays. The concentration of [3H]-epibatidine used was ~500 pM for competition binding assays. Nonspecific binding was assessed in parallel incubations in the presence of 300 μM nicotine. Bound and free ligands were separated by vacuum filtration through Whatman GF/C filters treated with 0.5% polyethylenimine. The filter-retained radioactivity was measured by liquid scintillation counting. Specific binding was defined as the difference between total binding and nonspecific binding. Data from competition binding assays were analyzed using Prism 5 (GraphPad Software, San Diego, Calif.). The Kd values for [3H]-epibatidine used for calculating Ki values of nAChR subtypes were 0.02 nM for α2β2, 0.08 nM for α2β4, 0.03 nM for α3β2, 0.3 nM for α3β4, 0.04 nM for α4β2, 0.09 nM for α4β4, 1.8 nM for α7 and 0.05 for rat forebrain.
16
Total Activities
12
Compounds Tested
1
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Confidence | 6 — Multiple protein complex / RNA |
| Curated By | Autocuration |
Target
Neuronal acetylcholine receptor; alpha4/beta2 (CHEMBL1907589) ↗| Type | PROTEIN COMPLEX |
| Organism | Homo sapiens |
Publication
2,5-disubstituted-pyridyl nicotinic ligands, and methods of use thereof
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| Ki | 16 | 8.03 | 10.21 |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL2024096 | — | — | 1 | 10.21 |
| CHEMBL1076903 | VARENICLINE | 4.0 | 1 | 9.92 |
| CHEMBL2323571 | — | — | 2 | 8.38 |
| CHEMBL2323570 | — | — | 2 | 8.37 |
| CHEMBL2323572 | — | — | 2 | 8.33 |
| CHEMBL2323569 | — | — | 2 | 8.02 |
| CHEMBL3 | NICOTINE | 4.0 | 1 | 8.00 |
| CHEMBL2323566 | — | — | 1 | 7.92 |
| CHEMBL2323568 | — | — | 1 | 7.14 |
| CHEMBL2323565 | — | — | 1 | 6.13 |
| CHEMBL2323567 | — | — | 1 | 5.00 |
| CHEMBL2323573 | — | — | 1 | - |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL2024096 | — | Ki | = | 0.062 | nM | 10.21 |
| CHEMBL1076903 | VARENICLINE | Ki | = | 0.12 | nM | 9.92 |
| CHEMBL2323571 | — | Ki | = | 4.2 | nM | 8.38 |
| CHEMBL2323570 | — | Ki | = | 4.3 | nM | 8.37 |
| CHEMBL2323570 | — | Ki | = | 4.3 | nM | 8.37 |
| CHEMBL2323572 | — | Ki | = | 4.7 | nM | 8.33 |
| CHEMBL2323571 | — | Ki | = | 5.1 | nM | 8.29 |
| CHEMBL2323572 | — | Ki | = | 5.3 | nM | 8.28 |
| CHEMBL2323569 | — | Ki | = | 9.6 | nM | 8.02 |
| CHEMBL2323569 | — | Ki | = | 9.6 | nM | 8.02 |
| CHEMBL3 | NICOTINE | Ki | = | 10.0 | nM | 8.00 |
| CHEMBL2323566 | — | Ki | = | 12.0 | nM | 7.92 |
| CHEMBL2323568 | — | Ki | = | 73.0 | nM | 7.14 |
| CHEMBL2323565 | — | Ki | = | 740.0 | nM | 6.13 |
| CHEMBL2323567 | — | Ki | = | 9900.0 | nM | 5.00 |
| CHEMBL2323573 | — | Ki | > | 100000.0 | nM | - |