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Assay Detail

CHEMBL5582987

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Binding affinity to double stranded DNA AT12 (unknown origin) incubated for 0.5 hrs in presence of different concentration DNA by fluorescence spectra analysis
6
Total Activities
6
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Not specified
Confidence 3 — Cell-line / Tissue
Curated By Autocuration

Target

dsDNA (CHEMBL3832741)
Type NUCLEIC-ACID
Organism Homo sapiens

Publication

A Comparative Study on the DNA Interactions and Biological Activities of Benzophenanthridine and Protoberberine Alkaloids.
Zu S, Long Z, Zhang X, Sheng J, Xu Y, Sun H, Liu X, Shangguan D.
J Nat Prod (2024) 87 : 2170 -2179
PubMed 39213483 · DOI

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
EC50 6 5.82 6.89

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL295124 BERBERINE 4.0 1 6.89
CHEMBL5594821 1 6.66
CHEMBL13045 CHELERYTHRINE 1 5.68
CHEMBL5593587 1 5.55
CHEMBL417799 SANGUINARIUM 2.0 1 5.38
CHEMBL362071 COPTISINE 1 4.73

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL295124 BERBERINE EC50 = 130.0 nM 6.89
CHEMBL5594821 EC50 = 220.0 nM 6.66
CHEMBL13045 CHELERYTHRINE EC50 = 2110.0 nM 5.68
CHEMBL5593587 EC50 = 2800.0 nM 5.55
CHEMBL417799 SANGUINARIUM EC50 = 4150.0 nM 5.38
CHEMBL362071 COPTISINE EC50 = 18490.0 nM 4.73