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Assay Detail

CHEMBL5733646

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Binding
Measurement of Interferon Production in Human PBMC: Activation of human TLR7 results in robust production of interferon by plasmacytoid dendritic cells present in human blood. The potential of compounds to induce interferon was evaluated by looking at the antiviral activity in the HCV replicon system upon incubation with conditioned media from peripheral blood mononuclear cells (PBMC). The HCV replicon assay is based on a bicistronic expression construct, as described by Lohmann et al. (Science (1999) 285: 110-113; Journal of Virology (2003) 77: 3007-15 3019) with modifications described by Krieger et al. (Journal of Virology (2001) 75: 4614-4624). The assay utilized the stably transfected cell line Huh-7 luc/neo harboring an RNA encoding a bicistronic expression construct comprising the wild type NS3-NS5B regions of HCV type 1b translated from an Internal Ribosome Entry Site (IRES) from encephalomyocarditis virus (EMCV), preceded by a reporter gene (Firefly-luciferase) and a selectable marker gene (neoR, neomycine phosphotransferase). The construct is flanked by 5′ and 3′ NTRs (non-translated regions) from HCV type 1b. Continued culture of the replicon cells in the presence of G418 (neoR) is dependent on the replication of the HCV RNA. The stably transfected replicon cells that replicate HCV RNA autonomously and to high levels, encoding inter alia luciferase, were used for profiling of the conditioned cell culture media. Briefly, PBMCs were prepared from buffy coats of at least two donors using a standard Ficoll centrifugation protocol. Isolated PBMCs were resuspended in RPMI medium supplemented with 10% human AB serum and 2×105 cells/well were dispensed into 384-well plates containing compounds (70 μL total volume). After overnight incubation, μL of supernatant was transferred to 384-well plates containing 2.2×103 replicon cells/well in 30 μL (plated the day before). Following 24 hours of incubation, replication was measured by assaying luciferase activity using 40 μL/well Steady Lite Plus substrate (Perkin Elmer) and measured with ViewLux ultraHTS microplate imager (Perkin Elmer). The inhibitory activity of each compound on the Huh7-luc/neo cells were reported as EC50 values, defined as the compound concentration applied to the PBMCs resulting in a 50% reduction of luciferase activity which in turn indicates the degree of replication of the replicon RNA on transfer of a defined amount of PBMC culture medium. Recombinant interferon α-2a (Roferon-A) was used as a standard control compound.
117
Total Activities
39
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Hepacivirus hominis
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Hepatitis C virus NS5B RNA-dependent RNA polymerase (CHEMBL5375)
Type SINGLE PROTEIN
Organism Hepatitis C virus

Publication

Purine derivatives for the treatment of viral infections
(2019)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
EC50 39 6.38 8.30
kon 39 - -
k_off 39 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5937877 3 8.30
CHEMBL5889149 3 8.22
CHEMBL5783938 3 7.47
CHEMBL5788491 3 7.34
CHEMBL5975355 3 7.33
CHEMBL6002866 3 7.30
CHEMBL5768331 3 7.30
CHEMBL5815143 3 7.28
CHEMBL5827189 3 7.09
CHEMBL5787964 3 6.89
CHEMBL5891486 3 6.80
CHEMBL5877246 3 6.77
CHEMBL5739594 3 6.77
CHEMBL6059593 3 6.77
CHEMBL5896426 3 6.70
CHEMBL5799441 3 6.48
CHEMBL6015159 3 6.28
CHEMBL5839354 3 6.23
CHEMBL5822874 3 6.19
CHEMBL6057565 3 6.17
CHEMBL5915428 3 6.16
CHEMBL6047888 3 6.16
CHEMBL6009749 3 6.14
CHEMBL5797438 3 6.12
CHEMBL5741431 3 6.10
CHEMBL5935259 3 6.09
CHEMBL6021186 3 5.92
CHEMBL5996137 3 5.90
CHEMBL5988364 3 5.89
CHEMBL5900687 3 5.87

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5937877 EC50 = 5.0 nM 8.30
CHEMBL5889149 EC50 = 6.0 nM 8.22
CHEMBL5783938 EC50 = 34.0 nM 7.47
CHEMBL5788491 EC50 = 46.0 nM 7.34
CHEMBL5975355 EC50 = 47.0 nM 7.33
CHEMBL6002866 EC50 = 50.0 nM 7.30
CHEMBL5768331 EC50 = 50.0 nM 7.30
CHEMBL5815143 EC50 = 53.0 nM 7.28
CHEMBL5827189 EC50 = 81.0 nM 7.09
CHEMBL5787964 EC50 = 130.0 nM 6.89
CHEMBL5891486 EC50 = 160.0 nM 6.80
CHEMBL6059593 EC50 = 170.0 nM 6.77
CHEMBL5739594 EC50 = 170.0 nM 6.77
CHEMBL5877246 EC50 = 170.0 nM 6.77
CHEMBL5896426 EC50 = 200.0 nM 6.70
CHEMBL5799441 EC50 = 330.0 nM 6.48
CHEMBL6015159 EC50 = 531.0 nM 6.28
CHEMBL5839354 EC50 = 590.0 nM 6.23
CHEMBL5822874 EC50 = 640.0 nM 6.19
CHEMBL6057565 EC50 = 680.0 nM 6.17
CHEMBL6047888 EC50 = 690.0 nM 6.16
CHEMBL5915428 EC50 = 700.0 nM 6.16
CHEMBL6009749 EC50 = 730.0 nM 6.14
CHEMBL5797438 EC50 = 760.0 nM 6.12
CHEMBL5741431 EC50 = 800.0 nM 6.10
CHEMBL5935259 EC50 = 810.0 nM 6.09
CHEMBL6021186 EC50 = 1210.0 nM 5.92
CHEMBL5996137 EC50 = 1270.0 nM 5.90
CHEMBL5988364 EC50 = 1300.0 nM 5.89
CHEMBL5900687 EC50 = 1340.0 nM 5.87
CHEMBL5858269 EC50 = 1510.0 nM 5.82
CHEMBL6016994 EC50 = 1660.0 nM 5.78
CHEMBL6061492 EC50 = 2580.0 nM 5.59
CHEMBL5842255 EC50 = 2750.0 nM 5.56
CHEMBL5905169 EC50 = 6720.0 nM 5.17
CHEMBL6055392 EC50 = 12360.0 nM 4.91
CHEMBL5896567 EC50 = 13970.0 nM 4.86
CHEMBL5807361 EC50 = 16940.0 nM 4.77
CHEMBL5937877 kon = - -
CHEMBL5988364 kon = - -
CHEMBL5783938 kon = - -
CHEMBL5842255 k_off = - s-1 -
CHEMBL6059593 k_off = - s-1 -
CHEMBL5900687 kon = - -
CHEMBL6021186 k_off = - s-1 -
CHEMBL5905169 k_off = - s-1 -
CHEMBL5905169 kon = - -
CHEMBL5935259 kon = - -
CHEMBL5935259 k_off = - s-1 -
CHEMBL5858269 k_off = - s-1 -