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Assay Detail

CHEMBL5734002

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
[3H]-Epibatidine Radioligand Binding Assay: Briefly, cultured cells at >80% confluence were removed from their flasks (80 cm2) with a disposable cell scraper and placed in 10 mL of 50 mM Tris.HCl buffer (pH 7.4, 4° C.). The cell suspension was centrifuged at 10,000×g for 5 min and the pellet was collected. The cell pellet was then homogenized in 10 mL buffer with a polytron homogenizer and centrifuged at 36,000 g for 10 min at 4° C. The membrane pellet was resuspended in fresh buffer, and aliquots of the membrane preparation were used for binding assays. The concentration of [3H]-epibatidine used was ˜500 pM for competition binding assays. Nonspecific binding was assessed in parallel incubations in the presence of 300 μM nicotine. Bound and free ligands were separated by vacuum filtration through Whatman GF/C filters treated with 0.5% polyethylenimine. The filter-retained radioactivity was measured by liquid scintillation counting. Specific binding was defined as the difference between total binding and nonspecific binding. Data from competition binding assays were analyzed using Prism 5 (GraphPad Software, San Diego, Calif.).
33
Total Activities
9
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 6 — Multiple protein complex / RNA
Curated By Autocuration

Target

Neuronal acetylcholine receptor; alpha2/beta2 (CHEMBL2109236)
Type PROTEIN COMPLEX
Organism Homo sapiens

Publication

2,5-disubstituted-pyridyl nicotinic ligands, and methods of use thereof
(2018)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
Ki 11 7.72 10.06
kon 11 - -
k_off 11 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL6007325 3 10.06
CHEMBL1076903 VARENICLINE 4.0 3 9.32
CHEMBL5896203 3 8.28
CHEMBL5873522 3 8.07
CHEMBL5912650 3 8.06
CHEMBL440464 (+/-)NICOTINE 3 7.92
CHEMBL5773270 3 7.89
CHEMBL5751653 6 7.80
CHEMBL5813361 6 6.89

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL6007325 Ki = 0.087 nM 10.06
CHEMBL1076903 VARENICLINE Ki = 0.48 nM 9.32
CHEMBL5896203 Ki = 5.3 nM 8.28
CHEMBL5873522 Ki = 8.6 nM 8.07
CHEMBL5912650 Ki = 8.7 nM 8.06
CHEMBL440464 (+/-)NICOTINE Ki = 12.0 nM 7.92
CHEMBL5773270 Ki = 13.0 nM 7.89
CHEMBL5751653 Ki = 16.0 nM 7.80
CHEMBL5813361 Ki = 130.0 nM 6.89
CHEMBL5751653 Ki = 970.0 nM 6.01
CHEMBL5813361 Ki = 22000.0 nM 4.66
CHEMBL5813361 k_off = - s-1 -
CHEMBL5751653 k_off = - s-1 -
CHEMBL5751653 kon = - -
CHEMBL5751653 k_off = - s-1 -
CHEMBL5751653 kon = - -
CHEMBL6007325 k_off = - s-1 -
CHEMBL6007325 kon = - -
CHEMBL1076903 VARENICLINE k_off = - s-1 -
CHEMBL1076903 VARENICLINE kon = - -
CHEMBL440464 (+/-)NICOTINE k_off = - s-1 -
CHEMBL440464 (+/-)NICOTINE kon = - -
CHEMBL5813361 kon = - -
CHEMBL5813361 k_off = - s-1 -
CHEMBL5873522 k_off = - s-1 -
CHEMBL5873522 kon = - -
CHEMBL5912650 k_off = - s-1 -
CHEMBL5912650 kon = - -
CHEMBL5813361 kon = - -
CHEMBL5896203 kon = - -
CHEMBL5773270 k_off = - s-1 -
CHEMBL5773270 kon = - -
CHEMBL5896203 k_off = - s-1 -