Assay Detail
Binding
CHEMBL5734764
Review assay metadata, readout intent, target linkage, and publication context from the same page.
Cell-Based Assay of NHE-3 Activity: Rat NHE-3-mediated Na+-dependent H+ antiport was measured using a modification of the pH sensitive dye method originally reported by Tsien (Proc. Natl. Acad. Sci. USA. (1984) 81(23): 7436-7440). Opossum kidney (OK) cells were obtained from the ATCC and propagated per their instructions. The rat NHE-3 gene was introduced into OK cells via electroporation, seeded into 96 well plates and grown overnight. Medium was aspirated from the wells, cells were washed twice with NaCl-HEPES buffer (100 mM NaCl, 50 mM HEPES, 10 mM glucose, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, pH 7.4), then incubated for 30 min at room temperature with NH4Cl-HEPES buffer (20 mM NH4Cl, 80 mM NaCl, 50 mM HEPES, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, pH 7.4) containing 5 uM BCECF-AM (Invitrogen). Cells were washed twice with Ammonium free, Na+-free HEPES (100 mM choline, 50 mM HEPES, 10 mM glucose, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, pH 7.4) and incubated in the same buffer for 10 minutes at room temperature to lower intracellular pH. NHE-3-mediated recovery of neutral intracellular pH was initiated by addition of Na-HEPES buffer containing 5 uM ethyl isopropyl amiloride (EIPA, a selective antagonist of NHE-1 activity that does not inhibit NHE-3) and 0-30 uM test compound, and monitoring the pH sensitive changes in BCECF fluorescence (ex 505 nm, λem 538 nm) normalized to the pH insensitive BCECF fluorescence (λex 439 nm, λem 538 nm). Initial rates were were plotted as the average 3-6 replicates, and pIC50 values were estimated using GraphPad Prism.
222
Total Activities
73
Compounds Tested
3
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Confidence | 0 — Uncurated / Unknown |
| Curated By | Autocuration |
Publication
Compounds and methods for inhibiting NHE-mediated antiport in the treatment of disorders associated with fluid retention or salt overload and gastrointestinal tract disorders
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 74 | 6.19 | 6.50 |
| kon | 74 | - | - |
| k_off | 74 | - | - |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL3894386 | — | — | 3 | 6.50 |
| CHEMBL3980037 | — | — | 3 | 6.50 |
| CHEMBL3920731 | — | — | 3 | 6.50 |
| CHEMBL3978422 | — | — | 3 | 6.50 |
| CHEMBL5804775 | — | — | 3 | 6.50 |
| CHEMBL3939463 | — | — | 3 | 6.50 |
| CHEMBL3962425 | — | — | 3 | 6.50 |
| CHEMBL5808975 | — | — | 3 | 6.50 |
| CHEMBL3898544 | — | — | 3 | 6.50 |
| CHEMBL5994572 | — | — | 3 | 6.50 |
| CHEMBL6015828 | — | — | 3 | 6.50 |
| CHEMBL5841857 | — | — | 3 | 6.50 |
| CHEMBL5942752 | — | — | 3 | 6.50 |
| CHEMBL3901448 | — | — | 3 | 6.50 |
| CHEMBL6008478 | — | — | 3 | 6.50 |
| CHEMBL3936313 | — | — | 3 | 6.50 |
| CHEMBL3927539 | — | — | 3 | 6.50 |
| CHEMBL6042824 | — | — | 3 | 6.50 |
| CHEMBL3976509 | — | — | 3 | 6.50 |
| CHEMBL3936880 | — | — | 3 | 6.50 |
| CHEMBL3915885 | — | — | 3 | 6.50 |
| CHEMBL3933988 | — | — | 3 | 6.50 |
| CHEMBL3960422 | — | — | 3 | 6.50 |
| CHEMBL5940839 | — | — | 6 | 6.50 |
| CHEMBL6035310 | — | — | 3 | 6.50 |
| CHEMBL3901018 | — | — | 3 | 5.50 |
| CHEMBL3970042 | — | — | 3 | 5.50 |
| CHEMBL5806021 | — | — | 3 | 5.50 |
| CHEMBL6006573 | — | — | 3 | 5.50 |
| CHEMBL3933111 | — | — | 3 | 5.50 |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL3976509 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3939463 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3920731 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3978422 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3962425 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3980037 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL5804775 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL5808975 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3898544 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL5994572 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL6015828 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL5841857 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL5942752 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3901448 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3936880 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL6042824 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3927539 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3915885 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3936313 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3933988 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3894386 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL5940839 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL3960422 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL6008478 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL6035310 | — | IC50 | = | 316.0 | nM | 6.50 |
| CHEMBL5988385 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL5961734 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL5795674 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL5890946 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL3933111 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL3912744 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL5194676 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL5806021 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL3970042 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL3901018 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL6006573 | — | IC50 | = | 3162.0 | nM | 5.50 |
| CHEMBL3942154 | — | kon | = | - | — | - |
| CHEMBL3942154 | — | k_off | = | - | s-1 | - |
| CHEMBL3903758 | — | k_off | = | - | s-1 | - |
| CHEMBL5826919 | — | kon | = | - | — | - |
| CHEMBL5826919 | — | k_off | = | - | s-1 | - |
| CHEMBL3939463 | — | kon | = | - | — | - |
| CHEMBL3990887 | — | IC50 | < | 100.0 | nM | - |
| CHEMBL3990220 | — | kon | = | - | — | - |
| CHEMBL3939463 | — | k_off | = | - | s-1 | - |
| CHEMBL3903758 | — | IC50 | < | 100.0 | nM | - |
| CHEMBL5947907 | — | IC50 | < | 100.0 | nM | - |
| CHEMBL3934078 | — | k_off | = | - | s-1 | - |
| CHEMBL5820405 | — | kon | = | - | — | - |
| CHEMBL3934078 | — | kon | = | - | — | - |