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Assay Detail

CHEMBL5735239

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Binding
Selective Inhibition Assays of Isolated Na,K-ATPase: To screen for isoform selectivity of the digoxin derivatives we compared inhibition of Na,K-ATPase activity of purified detergent-soluble human isoform complexes α1β1FXYD1, α2β1FXYD1, α2β2FXTD1 and α2β3FXYD1. Although all the preparations and assays were conducted with FXYD1 in order to stabilize the complexes, the FXYD1 suffix is omitted in naming of isoform complexes for simplicity.Na,K-ATPase activity of α/βPFXYD1 complexes was measured over one hour at 37° C. in a medium containing 130 mM NaCl, 5 mM KCl, 3 mM MgCl2, 1 mM EGTA, 25 mM Histidine, pH 7.4 and 1 mM ATP using the PiColor Lock gold malachite green assay (Inova Biosciences).The Na,K-ATPase activities were α1β1, 21.5±5.3 μmoles/min/mg; α2β1, 18.7±1.8 μmoles/min/mg, and α2β3, 10.7±1.9 μmoles/min/mg protein. As discussed below, an important kinetic property in relation to inhibition by cardiac glycosides is K0.5 for activation by K: α1β1-1.25±0.05 mM, α2β1-2.7±0.14 mM and α2β3 6.4±0.50 mM, respectively.Selectivity of the compounds for various isolated isoforms of human Na,K-ATPase was determined essentially as described before [Katz, A. et al., J Biol Chem., 2010, 285(25), pp. 19582-19592].ATPase activity assays as well as titrations with NaCl, KCl and vanadate were performed as described in Lifshitz-2007 and Loayza-1998 using PiColorLock™ malachite green assay (Inova Bioscience). Inhibitor assays were performed as described in Katz-2010. [3H]ouabain binding and K+-[3H]digoxin displacement assays were performed as described in Katz-2010.The percent inhibition VCG/V0 was calculated and Ki values were obtained by fitting the data to the function VCG/V0=Ki/([CG]+Ki)+c (CG stands for cardiac glycoside). Inhibition was estimated in 3-5 separate experiments and average Ki values±standard error of the mean (SEM) were calculated. The ratios Ki α1β1/α2β1, α1β1/α2β2 and α1β1/α2β3 was calculated for each compound.
69
Total Activities
21
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 6 — Multiple protein complex / RNA
Curated By Autocuration

Publication

Selective inhibitors of Alpha2-containing isoforms of Na,K-ATPase and use thereof for reduction of intraocular pressure
(2020)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
Ki 23 6.96 7.60
kon 23 - -
k_off 23 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5765464 6 7.60
CHEMBL5879229 6 7.51
CHEMBL5876237 3 7.50
CHEMBL5832044 3 7.24
CHEMBL5910596 3 7.15
CHEMBL5851200 3 7.14
CHEMBL6026321 3 7.07
CHEMBL5957388 3 7.06
CHEMBL254219 DIGITOXIN 4.0 3 7.05
CHEMBL5748673 3 7.04
CHEMBL5768226 3 6.99
CHEMBL6056661 3 6.96
CHEMBL6030183 3 6.92
CHEMBL5780414 3 6.87
CHEMBL6031986 3 6.86
CHEMBL5961305 3 6.86
CHEMBL5791351 3 6.83
CHEMBL1751 DIGOXIN 4.0 3 6.57
CHEMBL5814784 3 6.52
CHEMBL6005633 3 6.33
CHEMBL5850567 3 6.03

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5765464 Ki = 25.0 nM 7.60
CHEMBL5879229 Ki = 30.7 nM 7.51
CHEMBL5876237 Ki = 31.6 nM 7.50
CHEMBL5832044 Ki = 57.9 nM 7.24
CHEMBL5910596 Ki = 70.4 nM 7.15
CHEMBL5851200 Ki = 72.6 nM 7.14
CHEMBL6026321 Ki = 86.1 nM 7.07
CHEMBL5957388 Ki = 87.7 nM 7.06
CHEMBL254219 DIGITOXIN Ki = 89.0 nM 7.05
CHEMBL5748673 Ki = 92.0 nM 7.04
CHEMBL5765464 Ki = 95.8 nM 7.02
CHEMBL5768226 Ki = 103.0 nM 6.99
CHEMBL6056661 Ki = 109.0 nM 6.96
CHEMBL6030183 Ki = 119.0 nM 6.92
CHEMBL5879229 Ki = 135.0 nM 6.87
CHEMBL5780414 Ki = 135.0 nM 6.87
CHEMBL6031986 Ki = 138.0 nM 6.86
CHEMBL5961305 Ki = 138.0 nM 6.86
CHEMBL5791351 Ki = 149.0 nM 6.83
CHEMBL1751 DIGOXIN Ki = 268.0 nM 6.57
CHEMBL5814784 Ki = 301.0 nM 6.52
CHEMBL6005633 Ki = 464.0 nM 6.33
CHEMBL5850567 Ki = 944.0 nM 6.03
CHEMBL5961305 kon = - -
CHEMBL5851200 kon = - -
CHEMBL5851200 k_off = - s-1 -
CHEMBL1751 DIGOXIN kon = - -
CHEMBL1751 DIGOXIN k_off = - s-1 -
CHEMBL6056661 k_off = - s-1 -
CHEMBL5879229 kon = - -
CHEMBL5879229 k_off = - s-1 -
CHEMBL5765464 kon = - -
CHEMBL5765464 k_off = - s-1 -
CHEMBL6005633 kon = - -
CHEMBL6005633 k_off = - s-1 -
CHEMBL5748673 kon = - -
CHEMBL5765464 k_off = - s-1 -
CHEMBL5765464 kon = - -
CHEMBL5961305 k_off = - s-1 -
CHEMBL5879229 k_off = - s-1 -
CHEMBL5879229 kon = - -
CHEMBL5876237 k_off = - s-1 -
CHEMBL5876237 kon = - -
CHEMBL254219 DIGITOXIN kon = - -
CHEMBL254219 DIGITOXIN k_off = - s-1 -
CHEMBL5957388 kon = - -
CHEMBL5780414 k_off = - s-1 -
CHEMBL5780414 kon = - -
CHEMBL6030183 kon = - -
CHEMBL5957388 k_off = - s-1 -