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Assay Detail

CHEMBL5736676

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Test of Small Molecule Compounds for Inhibiting the Activity of VEGFR-2 Kinase: 1. Dilution of the compound: a total of 12 concentrations were obtained using a 4-fold gradient dilution from the highest concentration of 10000 nM (the maximum final concentration of the drug used in this experiment is 10000 nM, and the minimum final concentration is 0.002384 nM),2. 2.5 μl of the gradient-diluted compounds was taken with a transfer pipette to a 384-well plate,3. Addition of enzyme: 5 μl of 2×VEGFR-2 kinase was taken with a transfer pipette to the corresponding reaction well of the 384-well plate, which was mixed and pre-reacted at room temperature for 30 min,4. 2.5 μl of 4× substrate/ATP Mix was taken with a transfer pipette to the corresponding reaction well of the 384-well plate,5. Negative control: 2.5 μl/well 4× substrate/ATP Mix and 7.5 μl 1× Kinase Assay Buffer were added to the wells of the 384-well plate,Positive control: 2.5 μl/well 4× substrate/ATP Mix, 2.5 μl/well 1× Kinase Assay Buffer containing 4% DMSO, and 5 μl/well 2×VEGFR-2 solution were added to the 384-well plate. The final concentration of DMSO in the reaction system is 4%,6. The mixture was mixed well and then centrifuged and reacted at room temperature in dark for 60 min,7. Termination of the enzymatic reaction: 5 μl of 4× Stop solution was taken with a transfer pipette to the wells of the 384-well plate, mixed and then centrifuged, and reacted at room temperature for 5 min,8. Development of the reaction: 5 μl of 4× Detection Mix was taken with a transfer pipette to the wells of the 384-well plate for color development, and the mixture was mixed and then centrifuged and reacted at room temperature for 60 min,9. The 384-well plate was placed into the Envision plate reader and the signal was detected using the appropriate program,10. Analysis and processing of the raw data:The drug concentrations and the corresponding inhibition rates were input into GraphPad Prism5 for calculation, and the inhibition rate of the compound was calculated as follows: inhibition rate (%)=[1−(experimental well reading value−negative control well reading value)/(positive control well reading value−negative control well reading value)]×100%. Processing with GraphPad Prism5 software yielded the corresponding IC50 value (the concentration of the compound at which 50% of the highest inhibition of the enzyme is achieved).
282
Total Activities
94
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Vascular endothelial growth factor receptor 2 (CHEMBL279)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Urea-substituted aromatic ring-linked dioxane-quinazoline and -linked dioxane-quinoline compounds, preparation method therefor and use thereof
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 94 6.34 6.56
kon 94 - -
k_off 94 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5874162 3 6.56
CHEMBL5945085 3 6.56
CHEMBL5770681 3 6.56
CHEMBL6008339 3 6.56
CHEMBL5799814 3 6.56
CHEMBL5844336 3 6.56
CHEMBL5971093 3 6.56
CHEMBL6000551 3 6.56
CHEMBL6040662 3 6.56
CHEMBL5942361 3 6.56
CHEMBL6055627 3 6.56
CHEMBL5904893 3 6.56
CHEMBL5856485 3 6.56
CHEMBL6012463 3 6.56
CHEMBL5935920 3 5.56
CHEMBL4461971 3 5.56
CHEMBL6028431 3 5.56
CHEMBL5777081 3 5.56
CHEMBL4516513 3 -
CHEMBL6048799 3 -
CHEMBL4449250 3 -
CHEMBL5924697 3 -
CHEMBL5801339 3 -
CHEMBL5958298 3 -
CHEMBL5804750 3 -
CHEMBL5745036 3 -
CHEMBL5842502 3 -
CHEMBL5900757 3 -
CHEMBL5903372 3 -
CHEMBL5990409 3 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL6012463 IC50 = 275.0 nM 6.56
CHEMBL5799814 IC50 = 275.0 nM 6.56
CHEMBL5856485 IC50 = 275.0 nM 6.56
CHEMBL5904893 IC50 = 275.0 nM 6.56
CHEMBL6055627 IC50 = 275.0 nM 6.56
CHEMBL6040662 IC50 = 275.0 nM 6.56
CHEMBL5942361 IC50 = 275.0 nM 6.56
CHEMBL6000551 IC50 = 275.0 nM 6.56
CHEMBL5971093 IC50 = 275.0 nM 6.56
CHEMBL5844336 IC50 = 275.0 nM 6.56
CHEMBL5945085 IC50 = 275.0 nM 6.56
CHEMBL6008339 IC50 = 275.0 nM 6.56
CHEMBL5770681 IC50 = 275.0 nM 6.56
CHEMBL5874162 IC50 = 275.0 nM 6.56
CHEMBL5777081 IC50 = 2750.0 nM 5.56
CHEMBL4461971 IC50 = 2750.0 nM 5.56
CHEMBL6028431 IC50 = 2750.0 nM 5.56
CHEMBL5935920 IC50 = 2750.0 nM 5.56
CHEMBL5804750 IC50 < 50.0 nM -
CHEMBL5801339 k_off = - s-1 -
CHEMBL5801339 kon = - -
CHEMBL5801339 IC50 < 50.0 nM -
CHEMBL5958298 k_off = - s-1 -
CHEMBL5958298 kon = - -
CHEMBL5958298 IC50 < 50.0 nM -
CHEMBL5804750 k_off = - s-1 -
CHEMBL5804750 kon = - -
CHEMBL5745036 k_off = - s-1 -
CHEMBL5745036 kon = - -
CHEMBL5745036 IC50 < 50.0 nM -
CHEMBL5770681 k_off = - s-1 -
CHEMBL5806196 k_off = - s-1 -
CHEMBL5924697 IC50 < 50.0 nM -
CHEMBL5924697 kon = - -
CHEMBL4449250 IC50 < 50.0 nM -
CHEMBL4449250 kon = - -
CHEMBL4449250 k_off = - s-1 -
CHEMBL6048799 IC50 < 50.0 nM -
CHEMBL6048799 kon = - -
CHEMBL6048799 k_off = - s-1 -
CHEMBL4516513 IC50 < 50.0 nM -
CHEMBL4516513 kon = - -
CHEMBL4516513 k_off = - s-1 -
CHEMBL5757962 IC50 < 50.0 nM -
CHEMBL5757962 kon = - -
CHEMBL5757962 k_off = - s-1 -
CHEMBL5962040 IC50 < 50.0 nM -
CHEMBL5962040 kon = - -
CHEMBL5962040 k_off = - s-1 -
CHEMBL5900757 kon = - -