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Assay Detail

CHEMBL5737192

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Binding
DENV-2 Antiviral Assay: The antiviral activity of all the compounds of the invention was tested against the DENV-2 16681 strain which was labeled with enhanced green fluorescent protein (eGPF). The culture medium consists of minimal essential medium supplemented with 2% of heat-inactivated fetal calf serum, 0.04% gentamycin (50 mg/mL) and 2 mM of L-glutamine. Vero cells, obtained from ECACC, were suspended in culture medium and 25 μL was added to 384-well plates (2500 cells/well), which already contain the antiviral compounds. Typically, these plates contain a 5-fold serial dilution of 9 dilution steps of the test compound at 200 times the final concentration in 100% DMSO (200 nL). In addition, each compound concentration is tested in quadruplicate (final concentration range: 25 μM-0.000064 μM or 2.5 μM-0.0000064 μM for the most active compounds). Finally, each plate contains wells which are assigned as virus controls (containing cells and virus in the absence of compound), cell controls (containing cells in the absence of virus and compound) and medium controls (containing medium in the absence of cells, virus and compounds). To the wells assigned as medium control, 25 μL of culture medium was added instead of Vero cells. Once the cells are added to the plates, the plates were incubated for 30 minutes at room temperature to allow the cells to distribute evenly within the wells. Next, the plates were incubated in a fully humidified incubator (37° C., 5% CO2) until the next day. Then, DENV-2 strain 16681, labeled with eGFP, was added at a multiplicity of infection (MOI) of 0.5.Therefore, 15 μL of virus suspension was added to all the wells containing test compound and to the wells assigned as virus control. In parallel, 15 μL of culture medium was added to the medium and cell controls. Next, the plates were incubated for 3 days in a fully humidified incubator (37° C., 5% CO2). At the day of the read out, the eGFP fluorescence was measured using an automated fluorescence microscope at 488 nm (blue laser). Using an in-house LIMS system, inhibition dose response curves for each compound were calculated and the half maximal effective concentration (EC50) was determined. Therefore, the percent inhibition (I) for every test concentration is calculated using the following formula: I=100*(ST−SCC)/(SVC−SCC); ST, SCC and SVC are the amount of eGFP signal in the test compound, cell control and virus control wells, respectively. The EC50 represents the concentration of a compound at which the virus replication is inhibited with 50%, as measured by a 50% reduction of the eGFP fluorescent intensity compared to the virus control.
78
Total Activities
19
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism dengue virus type 2
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Genome polyprotein (CHEMBL5980)
Type SINGLE PROTEIN
Organism dengue virus type 2

Publication

Substituted indoline derivatives as dengue viral replication inhibitors
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
EC50 26 9.09 10.24
kon 26 - -
k_off 26 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5900541 3 10.24
CHEMBL5811385 3 10.11
CHEMBL5415684 3 10.00
CHEMBL5830357 3 9.96
CHEMBL5797766 6 9.96
CHEMBL5874365 6 9.96
CHEMBL5809753 3 9.92
CHEMBL5848915 3 9.92
CHEMBL5959992 3 9.82
CHEMBL6027458 3 9.55
CHEMBL5914928 3 9.52
CHEMBL5784469 6 9.42
CHEMBL5930792 3 9.41
CHEMBL5788293 6 9.28
CHEMBL5964150 6 9.25
CHEMBL5960906 6 9.20
CHEMBL5797148 6 9.19
CHEMBL5835372 3 9.00
CHEMBL5931081 3 7.80

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5900541 EC50 = 0.057 nM 10.24
CHEMBL5811385 EC50 = 0.078 nM 10.11
CHEMBL5415684 EC50 = 0.1 nM 10.00
CHEMBL5874365 EC50 = 0.11 nM 9.96
CHEMBL5830357 EC50 = 0.11 nM 9.96
CHEMBL5797766 EC50 = 0.11 nM 9.96
CHEMBL5848915 EC50 = 0.12 nM 9.92
CHEMBL5809753 EC50 = 0.12 nM 9.92
CHEMBL5959992 EC50 = 0.15 nM 9.82
CHEMBL6027458 EC50 = 0.28 nM 9.55
CHEMBL5914928 EC50 = 0.3 nM 9.52
CHEMBL5784469 EC50 = 0.38 nM 9.42
CHEMBL5930792 EC50 = 0.39 nM 9.41
CHEMBL5788293 EC50 = 0.52 nM 9.28
CHEMBL5964150 EC50 = 0.56 nM 9.25
CHEMBL5960906 EC50 = 0.63 nM 9.20
CHEMBL5797148 EC50 = 0.64 nM 9.19
CHEMBL5835372 EC50 = 0.99 nM 9.00
CHEMBL5797148 EC50 = 1.3 nM 8.89
CHEMBL5797766 EC50 = 2.3 nM 8.64
CHEMBL5874365 EC50 = 11.0 nM 7.96
CHEMBL5784469 EC50 = 15.0 nM 7.82
CHEMBL5931081 EC50 = 16.0 nM 7.80
CHEMBL5964150 EC50 = 36.0 nM 7.44
CHEMBL5788293 EC50 = 37.0 nM 7.43
CHEMBL5960906 EC50 = 250.0 nM 6.60
CHEMBL5835372 kon = - -
CHEMBL5797148 k_off = - s-1 -
CHEMBL5797148 kon = - -
CHEMBL5964150 k_off = - s-1 -
CHEMBL6027458 kon = - -
CHEMBL5788293 k_off = - s-1 -
CHEMBL5788293 kon = - -
CHEMBL5914928 k_off = - s-1 -
CHEMBL5914928 kon = - -
CHEMBL5788293 k_off = - s-1 -
CHEMBL5788293 kon = - -
CHEMBL5835372 k_off = - s-1 -
CHEMBL5930792 k_off = - s-1 -
CHEMBL5959992 k_off = - s-1 -
CHEMBL5959992 kon = - -
CHEMBL5931081 k_off = - s-1 -
CHEMBL5931081 kon = - -
CHEMBL5415684 k_off = - s-1 -
CHEMBL5960906 k_off = - s-1 -
CHEMBL5960906 kon = - -
CHEMBL5960906 k_off = - s-1 -
CHEMBL5930792 kon = - -
CHEMBL6027458 k_off = - s-1 -
CHEMBL5415684 kon = - -