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Assay Detail

CHEMBL5737269

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Binding
Biochemical ATX Assay (Assay A): 5 nM recombinant ATX (Cayman Chemicals) was supplemented to 50 mM Tris buffer (pH 8.0) containing 3 mM KCl, 1 mM CaCl2, 1 mM MgCl2 0.14 mM NaCl, and 0.1% bovine serum albumin. Test compounds were dissolved in DMSO and tested in the range of 0.1 nM to 10 μM. The enzymatic reaction (22.5 μL) was started by addition of 2.5 μL 10 μM 18:1 LPC (Avanti Lipids, Alabaster, Ala., USA). After 2-h incubation at room temperature, the reaction was stopped by addition of 20 μL water containing 500 nM 20:4 LPA as internal standard and 100 μL 1-butanol for extracting LPA. Subsequently, the plates were centrifuged at 4000 rpm, 4° C., for 2 min. The resultant upper butanol phase was directly used for injection at a RapidFire system (Agilent).The RapidFire autosampler was coupled to a binary pump (Agilent 1290) and a Triple Quad 6500 (ABSciex, Toronto, Canada). This system was equipped with a 10-μL loop, 5 μL Waters Atlantis HILIC cartridge (Waters, Elstree, UK), 90% acetonitrile containing 10 mM ammonium acetate as eluent A and 40% acetonitrile containing 10 mM ammoniumacetate as eluent B. For details see (Bretschneider et al., SLAS Discovery, 2017). 1 The MS was operated in negative mode with a source temperature of 550° C., curtain gas=35, gas 1=65, and gas 2=80. The following transitions and MS parameters (DP: declustering potential and CE: collision energy) for the respective LPAs were determined: 18:1 LPA at 435.2/152.8, DP=−40, CE=−28 and 20:4 LPA at 457.2/152.8, DP=−100, CE=−27).
42
Total Activities
14
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

Autotaxin (CHEMBL3691)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Pyridazines
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 14 8.43 8.70
kon 14 - -
k_off 14 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL4759980 3 8.70
CHEMBL5996718 3 8.70
CHEMBL5862361 3 8.66
CHEMBL4794512 3 8.52
CHEMBL5934711 3 8.52
CHEMBL5770104 3 8.52
CHEMBL4760475 3 8.40
CHEMBL4796631 3 8.40
CHEMBL4792073 3 8.40
CHEMBL6014289 3 8.30
CHEMBL5930964 3 8.30
CHEMBL3828074 ZIRITAXESTAT 3.0 3 8.30
CHEMBL4746361 3 8.22
CHEMBL4784550 3 8.10

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5996718 IC50 = 2.0 nM 8.70
CHEMBL4759980 IC50 = 2.0 nM 8.70
CHEMBL5862361 IC50 = 2.2 nM 8.66
CHEMBL5770104 IC50 = 3.0 nM 8.52
CHEMBL5934711 IC50 = 3.0 nM 8.52
CHEMBL4794512 IC50 = 3.0 nM 8.52
CHEMBL4792073 IC50 = 4.0 nM 8.40
CHEMBL4760475 IC50 = 4.0 nM 8.40
CHEMBL4796631 IC50 = 4.0 nM 8.40
CHEMBL3828074 ZIRITAXESTAT IC50 = 5.0 nM 8.30
CHEMBL5930964 IC50 = 5.0 nM 8.30
CHEMBL6014289 IC50 = 5.0 nM 8.30
CHEMBL4746361 IC50 = 6.0 nM 8.22
CHEMBL4784550 IC50 = 8.0 nM 8.10
CHEMBL4759980 kon = - -
CHEMBL4759980 k_off = - s-1 -
CHEMBL6014289 kon = - -
CHEMBL6014289 k_off = - s-1 -
CHEMBL4760475 kon = - -
CHEMBL4760475 k_off = - s-1 -
CHEMBL4784550 kon = - -
CHEMBL4796631 k_off = - s-1 -
CHEMBL5930964 kon = - -
CHEMBL5930964 k_off = - s-1 -
CHEMBL4794512 kon = - -
CHEMBL4794512 k_off = - s-1 -
CHEMBL5934711 kon = - -
CHEMBL5934711 k_off = - s-1 -
CHEMBL4746361 k_off = - s-1 -
CHEMBL4746361 kon = - -
CHEMBL4796631 kon = - -
CHEMBL4784550 k_off = - s-1 -
CHEMBL5862361 k_off = - s-1 -
CHEMBL5862361 kon = - -
CHEMBL5770104 kon = - -
CHEMBL5770104 k_off = - s-1 -
CHEMBL5996718 k_off = - s-1 -
CHEMBL5996718 kon = - -
CHEMBL4792073 kon = - -
CHEMBL3828074 ZIRITAXESTAT k_off = - s-1 -
CHEMBL4792073 k_off = - s-1 -
CHEMBL3828074 ZIRITAXESTAT kon = - -