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Assay Detail

CHEMBL5737556

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Binding
Adapta Assay: CDK7 (cyclin H): IC50 values of compounds against CDK7 (cyclin H) were determined by Adapta™ Assay at Invitrogen Life Technologies (Grand Island, N.Y.) where total reaction volume was 10 μL/well in low volume, white 384-well plate (#4512, Corning). 0.100 μL of 100× test compound in 100% DMSO (at specific solutions) were mixed with 2.4 μL of HEPES (30 mM), 2.5 μL of 4×ATP solution (153 μM) and 5 μL of 2× Substrate/Kinase mixture (the 2×CDK7/cyclin H/MNAT1/CDK7/9tide mixture was prepared in 50 mM HEPES pH 7.5, 0.01% BRIJ-35, 10 mM MgCl2, 1 mM EGTA). The final 10 μL Kinase Reaction consisted of 5-38.75 ng CDK7/cyclin H/MNAT1 and 200 μM CDK7/9tide in 32.5 mM HEPES pH 7.5, 0.005% BRIJ-35, 5 mM MgCl2, 0.5 mM EGTA. The plates were shaken for 30 seconds, centrifuged for 1 min at 1000×g, and incubated for 60 minutes at room temperature. 5 μL of Detection Mix (prepared in TR-FRET Dilution Buffer; the Detection mix consists of EDTA (30 mM), Eu-anti-ADP antibody (6 nM) and ADP tracer, and contains the EC60 concentration of tracer for 5-150 μM ATP) was added to the plates followed with another 30-second plate shake and centrifugation for 1 min at 1000×g, and the plates were further incubated at room temperature for one hour. The plates were read on fluorescence plate reader with Dual emission at 615 nm and 665 nm.
27
Total Activities
9
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 7 — Homologous single protein target
Curated By Autocuration

Target

Cyclin-dependent kinase 7/ cyclin H (CHEMBL2111288)
Type PROTEIN COMPLEX
Organism Homo sapiens

Publication

Heterocyclic compounds as kinase inhibitors
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 9 6.65 7.27
kon 9 - -
k_off 9 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5955040 3 7.27
CHEMBL6043217 3 7.07
CHEMBL5961536 3 7.02
CHEMBL6058548 3 6.84
CHEMBL5760232 3 6.79
CHEMBL5095102 INIXACICLIB 2.0 3 5.94
CHEMBL5806353 3 5.63
CHEMBL5765370 3 -
CHEMBL5943325 3 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5955040 IC50 = 54.0 nM 7.27
CHEMBL6043217 IC50 = 85.0 nM 7.07
CHEMBL5961536 IC50 = 96.0 nM 7.02
CHEMBL6058548 IC50 = 145.0 nM 6.84
CHEMBL5760232 IC50 = 163.0 nM 6.79
CHEMBL5095102 INIXACICLIB IC50 = 1160.0 nM 5.94
CHEMBL5806353 IC50 = 2360.0 nM 5.63
CHEMBL6043217 kon = - -
CHEMBL5961536 kon = - -
CHEMBL5806353 k_off = - s-1 -
CHEMBL5760232 k_off = - s-1 -
CHEMBL5760232 kon = - -
CHEMBL5955040 k_off = - s-1 -
CHEMBL5955040 kon = - -
CHEMBL6058548 k_off = - s-1 -
CHEMBL6058548 kon = - -
CHEMBL5961536 k_off = - s-1 -
CHEMBL5943325 k_off = - s-1 -
CHEMBL5943325 kon = - -
CHEMBL5943325 IC50 > 10000.0 nM -
CHEMBL5765370 k_off = - s-1 -
CHEMBL5765370 kon = - -
CHEMBL5806353 kon = - -
CHEMBL5095102 INIXACICLIB k_off = - s-1 -
CHEMBL5095102 INIXACICLIB kon = - -
CHEMBL6043217 k_off = - s-1 -
CHEMBL5765370 IC50 > 10000.0 nM -