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Assay Detail

CHEMBL5737564

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Binding
Sodium Influx Assay (In Vitro Assay): This sodium influx assay employs the use of the cell permeable, sodium sensitive dye ANG2 to quantify sodium ion influx through sodium channels which are maintained in an open state by use of sodium channel modulators. This high throughput sodium influx assay allows for rapid profiling and characterization of sodium channel blockers.In general, Trex HEK293 cells were stably transfected with an inducible expression vector containing the full-length cDNA coding for the desired human sodium channel α-subunit and with an expression vector containing full length cDNA coding for the β1-subunit. Sodium channel expressing cell lines were induced with tetracycline (1 μg/mL) and plated on 384-well PDL-coated plates at a density of 25K-30K cells/well in culture media (DMEM, containing 10% FBS and 1% L-glutamine). After overnight incubation (37° C., 5% CO2), culture media was removed and cells were loaded with 5 uM ANG2 dye for 1-1.5 h in Buffer 1 (155 mM NMDG, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, 10 mM HEPES, 10 mM glucose, adjusted with Tris to pH 7.4). Access dye was removed and cells were incubated with test compounds for 1 hr in buffer 1 containing sodium channel modulator(s) at room temperature. Hamamatsu FDSS μCell was used to perform a 1:1 addition of Na/K challenge buffer (140 mM NaCl, 20 mM HEPES, 1 mM CaCl2, 15 mM KCl, 1 mM MgCl2, 10 mM glucose, adjusted with Tris to pH 7.4) and simultaneously read plates at excitation wavelength of 530 nm and emission wavelength set at 558 nm. Percent inhibition of sodium ion influx was calculated for each test compound at each test concentration to determine the IC50 values.
1014
Total Activities
333
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

Sodium channel protein type 1 subunit alpha (CHEMBL1845)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Benzenesulfonamide compouds and their use as therapeutic agents
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 338 5.13 6.85
kon 338 - -
k_off 338 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5892019 3 6.85
CHEMBL5811440 3 6.83
CHEMBL5749965 3 6.52
CHEMBL5985658 3 6.52
CHEMBL5978160 3 6.50
CHEMBL5884546 3 6.44
CHEMBL5817529 3 6.41
CHEMBL5876162 3 6.32
CHEMBL5991533 3 6.31
CHEMBL5824011 3 6.29
CHEMBL6050574 3 6.20
CHEMBL5952401 3 6.18
CHEMBL5773548 3 6.17
CHEMBL5982799 3 6.14
CHEMBL5924319 3 6.12
CHEMBL6044605 3 6.11
CHEMBL5890093 3 6.10
CHEMBL5756729 3 6.09
CHEMBL5919972 3 6.08
CHEMBL5890608 3 6.08
CHEMBL5765898 3 6.05
CHEMBL5869691 3 6.04
CHEMBL5879194 3 6.03
CHEMBL5959595 3 6.00
CHEMBL5751008 3 5.98
CHEMBL6018806 3 5.96
CHEMBL5953924 3 5.95
CHEMBL5831980 3 5.93
CHEMBL5858302 3 5.90
CHEMBL5987341 3 5.89

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5892019 IC50 = 142.0 nM 6.85
CHEMBL5811440 IC50 = 147.0 nM 6.83
CHEMBL5985658 IC50 = 303.0 nM 6.52
CHEMBL5749965 IC50 = 301.0 nM 6.52
CHEMBL5978160 IC50 = 314.0 nM 6.50
CHEMBL5884546 IC50 = 364.0 nM 6.44
CHEMBL5817529 IC50 = 388.0 nM 6.41
CHEMBL5876162 IC50 = 476.0 nM 6.32
CHEMBL5991533 IC50 = 494.0 nM 6.31
CHEMBL5824011 IC50 = 516.0 nM 6.29
CHEMBL6050574 IC50 = 637.0 nM 6.20
CHEMBL5952401 IC50 = 667.0 nM 6.18
CHEMBL5773548 IC50 = 684.0 nM 6.17
CHEMBL5982799 IC50 = 726.0 nM 6.14
CHEMBL5924319 IC50 = 767.0 nM 6.12
CHEMBL6044605 IC50 = 784.0 nM 6.11
CHEMBL5890093 IC50 = 794.0 nM 6.10
CHEMBL5756729 IC50 = 816.0 nM 6.09
CHEMBL5919972 IC50 = 840.0 nM 6.08
CHEMBL5890608 IC50 = 831.0 nM 6.08
CHEMBL5765898 IC50 = 888.0 nM 6.05
CHEMBL5869691 IC50 = 908.0 nM 6.04
CHEMBL5879194 IC50 = 941.0 nM 6.03
CHEMBL5959595 IC50 = 999.0 nM 6.00
CHEMBL5751008 IC50 = 1056.0 nM 5.98
CHEMBL6018806 IC50 = 1109.0 nM 5.96
CHEMBL5953924 IC50 = 1129.0 nM 5.95
CHEMBL5831980 IC50 = 1176.0 nM 5.93
CHEMBL5858302 IC50 = 1271.0 nM 5.90
CHEMBL5927344 IC50 = 1292.0 nM 5.89
CHEMBL5987341 IC50 = 1278.0 nM 5.89
CHEMBL6041957 IC50 = 1341.0 nM 5.87
CHEMBL4519633 IC50 = 1358.0 nM 5.87
CHEMBL6034311 IC50 = 1385.0 nM 5.86
CHEMBL5755592 IC50 = 1542.0 nM 5.81
CHEMBL4530743 IC50 = 1545.0 nM 5.81
CHEMBL5933545 IC50 = 1570.0 nM 5.80
CHEMBL6020694 IC50 = 1630.0 nM 5.79
CHEMBL5765991 IC50 = 1626.0 nM 5.79
CHEMBL6007814 IC50 = 1872.0 nM 5.73
CHEMBL4544968 IC50 = 1886.0 nM 5.72
CHEMBL5880844 IC50 = 1904.0 nM 5.72
CHEMBL5954712 IC50 = 1938.0 nM 5.71
CHEMBL6011164 IC50 = 1996.0 nM 5.70
CHEMBL5771643 IC50 = 2115.0 nM 5.67
CHEMBL6043611 IC50 = 2139.0 nM 5.67
CHEMBL6065622 IC50 = 2230.0 nM 5.65
CHEMBL4450313 IC50 = 2285.0 nM 5.64
CHEMBL5824188 IC50 = 2350.0 nM 5.63
CHEMBL5997921 IC50 = 2363.0 nM 5.63