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Assay Detail

CHEMBL5737675

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Biological Assay (standard): NMDA receptors are ion channels that are highly permeable to Ca2+ ions, rendering it possible to monitor NMDA receptor function using cell-based calcium flux assay. In this assay, co-agonists glutamate and glycine are added to cells heterologously expressing human GluN1/GluN2B NMDA receptors to initiate cellular Ca2+ influx. The time course of the changes in intracellular calcium is measured using a fluorescent dye and a FLIPR (Fluorometric Imaging Plate Reader) device.Twenty four hours before measurements, the expression of the NMDA receptors in the stable cell line is induced with Tet-On inducible system in the presence of a non-selective NMDA receptor blocker. On the day of the experiment, cell culture media is carefully washed and the cells are loaded with Calcium 5 Dye Kit (Molecular Devices) in dye loading buffer containing 137 mM NaCl, 4 mM KCl, 2 mM CaCl2), 0.5 mM MgCl2, 10 mM HEPES and 5 mM D-glucose; pH 7.4. After 1 h incubation at the room temperature, the dye is washed away with the assay buffer (137 mM NaCl, 4 mM KCl, 2 mM CaCl2), 0.01 mM EDTA, 10 mM HEPES and 5 mM D-glucose; pH 7.4) In the FLIPR TETRA reader, various concentrations of the test compounds are added to the cells for 5 min while fluorescence is monitored to detect potential agonist activity. Next, co-agonists, glutamate and glycine are added for another 5 minutes. The concentration of glutamate corresponding to ~EC40 used to maximize the assay's signal window and ability to detect NMDA receptor antagonists and negative allosteric modulators. A saturating concentration (10 μM) of glycine is also present in the assay. A non-selective NMDA receptor antagonist, (+)MK-801 is used as a positive control for antagonist activity. The fluorescent signal in the presence of test compounds is quantified and normalized to the signal defined by the appropriate control wells.
1590
Total Activities
529
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 7 — Homologous single protein target
Curated By Autocuration

Target

Glutamate NMDA receptor; GRIN1/GRIN2B (CHEMBL1907603)
Type PROTEIN COMPLEX
Organism Homo sapiens

Publication

Substituted 1H-imidazo[4,5-b]pyridin-2(3H)-ones and their use as GLUN2B receptor modulators
(2021)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 530 6.77 8.70
kon 530 - -
k_off 530 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5757337 3 8.70
CHEMBL5818547 3 8.40
CHEMBL5920572 3 8.30
CHEMBL4750166 3 8.22
CHEMBL5970858 3 8.22
CHEMBL5844341 3 8.15
CHEMBL6023281 3 8.15
CHEMBL5830064 3 8.10
CHEMBL5827692 3 8.10
CHEMBL5762840 3 8.05
CHEMBL5976956 3 8.05
CHEMBL5967503 3 8.05
CHEMBL5882989 3 8.05
CHEMBL6059880 3 8.00
CHEMBL5979772 3 8.00
CHEMBL4779889 6 8.00
CHEMBL5971320 3 8.00
CHEMBL5984073 3 7.96
CHEMBL6032585 3 7.92
CHEMBL5962480 3 7.92
CHEMBL5764671 3 7.89
CHEMBL5898329 3 7.89
CHEMBL5777955 3 7.89
CHEMBL5850796 3 7.85
CHEMBL5896232 3 7.85
CHEMBL5886245 3 7.85
CHEMBL6052565 3 7.82
CHEMBL5812378 3 7.82
CHEMBL6002526 3 7.82
CHEMBL5996762 3 7.82

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5757337 IC50 = 2.0 nM 8.70
CHEMBL5818547 IC50 = 4.0 nM 8.40
CHEMBL5920572 IC50 = 5.0 nM 8.30
CHEMBL5970858 IC50 = 6.0 nM 8.22
CHEMBL4750166 IC50 = 6.0 nM 8.22
CHEMBL5844341 IC50 = 7.0 nM 8.15
CHEMBL6023281 IC50 = 7.0 nM 8.15
CHEMBL5827692 IC50 = 8.0 nM 8.10
CHEMBL5830064 IC50 = 8.0 nM 8.10
CHEMBL5976956 IC50 = 9.0 nM 8.05
CHEMBL5967503 IC50 = 9.0 nM 8.05
CHEMBL5882989 IC50 = 9.0 nM 8.05
CHEMBL5762840 IC50 = 9.0 nM 8.05
CHEMBL4779889 IC50 = 10.0 nM 8.00
CHEMBL5971320 IC50 = 10.0 nM 8.00
CHEMBL6059880 IC50 = 10.0 nM 8.00
CHEMBL5979772 IC50 = 10.0 nM 8.00
CHEMBL5984073 IC50 = 11.0 nM 7.96
CHEMBL5962480 IC50 = 12.0 nM 7.92
CHEMBL6032585 IC50 = 12.0 nM 7.92
CHEMBL5764671 IC50 = 13.0 nM 7.89
CHEMBL5898329 IC50 = 13.0 nM 7.89
CHEMBL5777955 IC50 = 13.0 nM 7.89
CHEMBL5850796 IC50 = 14.0 nM 7.85
CHEMBL5886245 IC50 = 14.0 nM 7.85
CHEMBL5896232 IC50 = 14.0 nM 7.85
CHEMBL5997078 IC50 = 15.0 nM 7.82
CHEMBL6052565 IC50 = 15.0 nM 7.82
CHEMBL5996762 IC50 = 15.0 nM 7.82
CHEMBL5812378 IC50 = 15.0 nM 7.82
CHEMBL6002526 IC50 = 15.0 nM 7.82
CHEMBL5913399 IC50 = 16.0 nM 7.80
CHEMBL6025502 IC50 = 16.0 nM 7.80
CHEMBL5895933 IC50 = 16.0 nM 7.80
CHEMBL5770130 IC50 = 16.0 nM 7.80
CHEMBL5949204 IC50 = 16.0 nM 7.80
CHEMBL6035484 IC50 = 16.0 nM 7.80
CHEMBL5887678 IC50 = 17.0 nM 7.77
CHEMBL5751981 IC50 = 17.0 nM 7.77
CHEMBL5992293 IC50 = 17.0 nM 7.77
CHEMBL5912083 IC50 = 17.0 nM 7.77
CHEMBL5918433 IC50 = 17.0 nM 7.77
CHEMBL5928792 IC50 = 17.0 nM 7.77
CHEMBL6040677 IC50 = 17.0 nM 7.77
CHEMBL5801576 IC50 = 17.0 nM 7.77
CHEMBL5981294 IC50 = 17.0 nM 7.77
CHEMBL5791781 IC50 = 18.0 nM 7.75
CHEMBL5883032 IC50 = 18.0 nM 7.75
CHEMBL5869000 IC50 = 19.0 nM 7.72
CHEMBL5922388 IC50 = 19.0 nM 7.72