Skip to main content
Free research Free research Free assay review with research home and workspace preview
Quick search ChEMBL 36
Assay Detail

CHEMBL5737912

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Enzymatic Assay: TDO2: Recombinant human TDO comprising amino acids 19-407 with a N-terminal hexahistidine tag expressed in E. coli and purified to homogeneity is incubated at a final concentration of 15 nM in assay buffer consisting of 75 mM phosphate buffer at pH7 supplemented with 100 μM ascorbic acid, 50 U/ml Catalase, 0.01% BSA, and 0.01% Tween 20 (protocol modified from Seegers et al, JBS 2014). Example compounds are serially diluted in DMSO, further diluted in phosphate buffer, and added to the reaction mixture at final concentrations ranging from 10 μM to 0.5 nM. The final DMSO concentration is 0.6%. Following a pre-incubation of 30 minutes at RT, the reaction is started by the addition of L-tryptophan at a final concentration of 200 μM in assay buffer. After 30 minutes of incubation at RT, 3 μL of the reaction mixture are transferred to a 384 deep well plate containing 25 μL of deionized water. 100 μl of 200 nM L-Tryptophan-(indole-d5) in cold 100% methanol are added followed by a 10 minutes centrifugation at 4,000 rpm at 4° C. An additional 75 μL of deionized water are then added and followed by a 10 minutes centrifugation at 4,000 rpm at 4° C. The product of the reaction N′-Formylkynurenine (NFK) is quantified by LCMS and normalized to the L-Tryptophan-(indole-d5) signal. Samples with 0.6% DMSO (0% effect) and a TDO/IDO inhibitor (100% effect) are used as control samples to set the parameters for the non-linear regression necessary for the determination of the half-maximal inhibitory concentration (IC50) for each compound. For each compound concentration the percentage of activity compared to 0% and 100% effect is calculated as average±STDEV (each concentration measured in duplicate). IC50 values and curves are generated with XLfit software (IDBS) using Dose-Response One Site model 203 (four parameter logistic curve model). When compounds are measured multiple times, mean values are given.
675
Total Activities
224
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Tryptophan 2,3-dioxygenase (CHEMBL2140)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Inhibitors of indoleamine 2,3-dioxygenase and/or tryptophan 2,3-dioxygenase
(2022)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 225 6.22 7.94
kon 225 - -
k_off 225 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5991135 3 7.94
CHEMBL5767906 3 7.80
CHEMBL5945822 6 7.70
CHEMBL5950224 3 7.70
CHEMBL5917176 3 7.65
CHEMBL5911062 3 7.54
CHEMBL5879847 3 7.53
CHEMBL5775679 3 7.42
CHEMBL6019793 3 7.37
CHEMBL5906358 3 7.26
CHEMBL5783691 3 7.22
CHEMBL5807169 3 7.20
CHEMBL6011966 3 7.17
CHEMBL5977584 3 7.15
CHEMBL5977530 3 7.14
CHEMBL5981696 3 6.98
CHEMBL5827697 3 6.94
CHEMBL5914264 3 6.89
CHEMBL6054393 3 6.88
CHEMBL5959952 3 6.88
CHEMBL5917964 3 6.86
CHEMBL6061360 3 6.84
CHEMBL5852044 3 6.82
CHEMBL5858320 3 6.82
CHEMBL6012994 3 6.79
CHEMBL5853262 3 6.79
CHEMBL6061854 3 6.77
CHEMBL5763200 3 6.76
CHEMBL5950258 3 6.75
CHEMBL5817676 3 6.74

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5991135 IC50 = 11.6 nM 7.94
CHEMBL5767906 IC50 = 15.8 nM 7.80
CHEMBL5950224 IC50 = 19.9 nM 7.70
CHEMBL5945822 IC50 = 20.0 nM 7.70
CHEMBL5917176 IC50 = 22.3 nM 7.65
CHEMBL5911062 IC50 = 28.7 nM 7.54
CHEMBL5879847 IC50 = 29.3 nM 7.53
CHEMBL5775679 IC50 = 37.9 nM 7.42
CHEMBL5945822 IC50 = 39.9 nM 7.40
CHEMBL6019793 IC50 = 42.5 nM 7.37
CHEMBL5906358 IC50 = 54.7 nM 7.26
CHEMBL5783691 IC50 = 60.4 nM 7.22
CHEMBL5807169 IC50 = 62.6 nM 7.20
CHEMBL6011966 IC50 = 66.8 nM 7.17
CHEMBL5977584 IC50 = 70.6 nM 7.15
CHEMBL5977530 IC50 = 72.9 nM 7.14
CHEMBL5981696 IC50 = 104.0 nM 6.98
CHEMBL5827697 IC50 = 115.0 nM 6.94
CHEMBL5914264 IC50 = 129.0 nM 6.89
CHEMBL5959952 IC50 = 133.0 nM 6.88
CHEMBL6054393 IC50 = 131.0 nM 6.88
CHEMBL5917964 IC50 = 138.0 nM 6.86
CHEMBL6061360 IC50 = 143.0 nM 6.84
CHEMBL5852044 IC50 = 153.0 nM 6.82
CHEMBL5858320 IC50 = 151.0 nM 6.82
CHEMBL5853262 IC50 = 162.0 nM 6.79
CHEMBL6012994 IC50 = 164.0 nM 6.79
CHEMBL6061854 IC50 = 171.0 nM 6.77
CHEMBL5763200 IC50 = 172.0 nM 6.76
CHEMBL5950258 IC50 = 177.0 nM 6.75
CHEMBL5817676 IC50 = 181.0 nM 6.74
CHEMBL5874424 IC50 = 187.0 nM 6.73
CHEMBL5981334 IC50 = 190.0 nM 6.72
CHEMBL6017414 IC50 = 191.0 nM 6.72
CHEMBL5890619 IC50 = 190.0 nM 6.72
CHEMBL5872509 IC50 = 190.0 nM 6.72
CHEMBL5875287 IC50 = 195.0 nM 6.71
CHEMBL5953469 IC50 = 193.0 nM 6.71
CHEMBL6059448 IC50 = 202.0 nM 6.70
CHEMBL5842388 IC50 = 203.0 nM 6.69
CHEMBL5912430 IC50 = 204.0 nM 6.69
CHEMBL5867700 IC50 = 206.0 nM 6.69
CHEMBL5936519 IC50 = 218.0 nM 6.66
CHEMBL6027024 IC50 = 228.0 nM 6.64
CHEMBL5984490 IC50 = 228.0 nM 6.64
CHEMBL5807961 IC50 = 239.0 nM 6.62
CHEMBL5961964 IC50 = 247.0 nM 6.61
CHEMBL6031176 IC50 = 246.0 nM 6.61
CHEMBL5989385 IC50 = 246.0 nM 6.61
CHEMBL5824104 IC50 = 255.0 nM 6.59