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Assay Detail

CHEMBL5738092

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Binding
Fluorescence Polarization Binding Assay: Table 3: The FP assay was then adapted for HTS and used to screen 120,000 small molecule library for compounds that displaced probe 5 from the T4 binding of TTR. The FP assay was performed in 384-well plate using very low concentration of probe 5 (1.5 nM) and TTR (50 nM) in a 10 μL assay volume. A detergent (0.01% Triton-X100) was added to the assay buffer to avoid any false positive hits from promiscuous, aggregate-based inhibitors. The assay demonstrated robust performance, with a very good dynamic range (70-230 mP) and a Z′ factor in the range of 0.57-0.78 (FIGS. 4A and 4B). Hits were defined as compounds that resulted in at least 50% decrease in fluorescence polarization and demonstrated relative fluorescence between 70 and 130%. Many fluorescence quenchers and enhancers having less than 70% and greater than 130% total fluorescence relative to a control, respectively, were excluded from the hit list. 200 compounds were designated as positive hits (0.167% hit rate). The 200 hits were then evaluated in a dose-response manner and their IC50 (compound concentration that resulted in 50% decrease in the FP signal) values were determined. Among the 200 compounds screened, 33 compounds showed a dose-response effect on the FP and displayed IC50≤10 μM.
102
Total Activities
34
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

Transthyretin (CHEMBL3194)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Identification of stabilizers of multimeric proteins
(2022)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 34 5.74 6.56
kon 34 - -
k_off 34 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3695459 3 6.56
CHEMBL63323 NIFLUMIC ACID 2.0 3 6.54
CHEMBL3695460 3 6.53
CHEMBL591504 3 6.52
CHEMBL1581319 3 6.48
CHEMBL1835582 3 6.36
CHEMBL509 MECLOFENAMIC ACID 4.0 3 6.30
CHEMBL5799438 3 6.23
CHEMBL28 APIGENIN 3 6.18
CHEMBL1231799 3 6.13
CHEMBL168276 3,5-DINITROCATECHOL (OR-486) 3 6.13
CHEMBL1256291 3 6.12
CHEMBL183906 3 6.09
CHEMBL1348329 3 6.08
CHEMBL3695463 3 5.94
CHEMBL3695464 3 5.88
CHEMBL3695465 3 5.59
CHEMBL3695466 3 5.58
CHEMBL3695467 3 5.47
CHEMBL2094716 3 5.43
CHEMBL139 DICLOFENAC 4.0 3 5.43
CHEMBL3695469 3 5.41
CHEMBL3695470 3 5.38
CHEMBL493923 3 5.32
CHEMBL3695471 3 5.31
CHEMBL3695472 3 5.31
CHEMBL3695473 3 5.27
CHEMBL3695474 3 5.25
CHEMBL181852 3 5.24
CHEMBL3695475 3 5.06

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3695459 IC50 = 277.0 nM 6.56
CHEMBL63323 NIFLUMIC ACID IC50 = 289.0 nM 6.54
CHEMBL3695460 IC50 = 296.0 nM 6.53
CHEMBL591504 IC50 = 301.0 nM 6.52
CHEMBL1581319 IC50 = 329.0 nM 6.48
CHEMBL1835582 IC50 = 433.0 nM 6.36
CHEMBL509 MECLOFENAMIC ACID IC50 = 504.0 nM 6.30
CHEMBL5799438 IC50 = 586.0 nM 6.23
CHEMBL28 APIGENIN IC50 = 653.0 nM 6.18
CHEMBL168276 3,5-DINITROCATECHOL (OR-486) IC50 = 741.0 nM 6.13
CHEMBL1231799 IC50 = 741.0 nM 6.13
CHEMBL1256291 IC50 = 755.0 nM 6.12
CHEMBL183906 IC50 = 815.0 nM 6.09
CHEMBL1348329 IC50 = 842.0 nM 6.08
CHEMBL3695463 IC50 = 1152.0 nM 5.94
CHEMBL3695464 IC50 = 1306.0 nM 5.88
CHEMBL3695465 IC50 = 2585.0 nM 5.59
CHEMBL3695466 IC50 = 2656.0 nM 5.58
CHEMBL3695467 IC50 = 3349.0 nM 5.47
CHEMBL139 DICLOFENAC IC50 = 3742.0 nM 5.43
CHEMBL2094716 IC50 = 3707.0 nM 5.43
CHEMBL3695469 IC50 = 3927.0 nM 5.41
CHEMBL3695470 IC50 = 4217.0 nM 5.38
CHEMBL493923 IC50 = 4786.0 nM 5.32
CHEMBL3695471 IC50 = 4881.0 nM 5.31
CHEMBL3695472 IC50 = 4933.0 nM 5.31
CHEMBL3695473 IC50 = 5414.0 nM 5.27
CHEMBL3695474 IC50 = 5604.0 nM 5.25
CHEMBL181852 IC50 = 5803.0 nM 5.24
CHEMBL3695475 IC50 = 8690.0 nM 5.06
CHEMBL3695476 IC50 = 9764.0 nM 5.01
CHEMBL3695477 IC50 = 10039.0 nM 5.00
CHEMBL3695478 IC50 = 10552.0 nM 4.98
CHEMBL241657 IC50 = 10957.0 nM 4.96
CHEMBL181852 kon = - -
CHEMBL3695474 kon = - -
CHEMBL241657 k_off = - s-1 -
CHEMBL3695473 k_off = - s-1 -
CHEMBL3695474 k_off = - s-1 -
CHEMBL493923 k_off = - s-1 -
CHEMBL493923 kon = - -
CHEMBL3695470 k_off = - s-1 -
CHEMBL3695476 k_off = - s-1 -
CHEMBL3695470 kon = - -
CHEMBL3695469 k_off = - s-1 -
CHEMBL3695469 kon = - -
CHEMBL3695477 k_off = - s-1 -
CHEMBL139 DICLOFENAC k_off = - s-1 -
CHEMBL3695478 k_off = - s-1 -
CHEMBL3695477 kon = - -