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Assay Detail

CHEMBL5739059

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Binding
Lipoxygenase-15 Assay: Briefly, reactions were carried out in Corning 96 half-well black, flat bottom assay plates and contained final concentrations of 50 μM arachidonic acid (Cayman Chemical) as a substrate, 1:10 (v:v) cholate mix (2% (w:v) sodium cholate (Sigma-Aldrich) and 2% (v:v) DMSO with or without test compounds), 40 μM dihydrorhodamine 123 (Sigma-Aldrich) and 1:200 lipoxygenase-15 enzyme (soybean enzyme from Lipoxygenase Inhibitor Screening Assay Kit Item No. 760700 (Cayman Chemical)) in 100 mM Tris-HCl, pH 7.5. Cholate mix contained 2% (w:v) sodium cholate dissolved in 2% (v:v) DMSO. Cholate mix is used for the positive control wells (100% enzymatic activity). Due to the fact, that test compound stocks were dissolved in 100% DMSO, cholate mix was adjusted (sodium cholate was dissolved in water) and test compound DMSO stocks were further diluted with this solution in order to keep the final DMSO concentration in reaction below 0.2% and equal in all wells. Assay buffers and DMSO were deoxygenated to keep test compounds in the reduced state**. Stock solutions of test compounds were prepared in DMSO and then diluted to final assay concentrations in cholate mix such that final cholate and DMSO concentrations were maintained at 0.2%. Reactions were initiated by the addition of 50 μL of enzyme mix (80 μM dihydrorhodamine 123 and 1:100 lipoxygenase-15 enzyme in 100 mM Tris-HCl, pH 7.5) to wells containing 50 μL substrate and cholate mix in 100 mM Tris-HCl, pH 7.5 and linear rates were assessed by measuring fluorescence, using excitation/emission of 485/535 nm on a Hidex Sense microplate reader every 10 seconds for 5 minutes at room temperature.
18
Total Activities
6
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Polyunsaturated fatty acid lipoxygenase ALOX15 (CHEMBL2903)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Compositions and methods for the prevention and/or treatment of mitochondrial disease, including Friedreich's ataxia
(2023)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 6 5.73 6.23
kon 6 - -
k_off 6 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL1812161 VATIQUINONE 3.0 3 6.23
CHEMBL5919820 3 6.08
CHEMBL6056537 3 5.57
CHEMBL5869116 3 5.53
CHEMBL5885526 3 5.24
CHEMBL5859104 3 -

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL1812161 VATIQUINONE IC50 = 590.0 nM 6.23
CHEMBL5919820 IC50 = 830.0 nM 6.08
CHEMBL6056537 IC50 = 2670.0 nM 5.57
CHEMBL5869116 IC50 = 2930.0 nM 5.53
CHEMBL5885526 IC50 = 5760.0 nM 5.24
CHEMBL5859104 kon = - -
CHEMBL5859104 k_off = - s-1 -
CHEMBL5869116 kon = - -
CHEMBL5869116 k_off = - s-1 -
CHEMBL5885526 kon = - -
CHEMBL5885526 k_off = - s-1 -
CHEMBL5919820 kon = - -
CHEMBL5919820 k_off = - s-1 -
CHEMBL6056537 kon = - -
CHEMBL6056537 k_off = - s-1 -
CHEMBL1812161 VATIQUINONE kon = - -
CHEMBL5859104 IC50 < 1000.0 nM -
CHEMBL1812161 VATIQUINONE k_off = - s-1 -