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Compound Detail

CHEMBL384124

GENTAMICIN C
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CN[C@@H]1[C@H](O)[C@@H](O[C@@H]2[C@@H](O)[C@H](O[C@H]3O[C@H](CN)CC[C@H]3N)[C@@H](N)C[C@H]2N)OC[C@]1(C)O

Basic Information

ChEMBL ID CHEMBL384124
Name GENTAMICIN C
Phase Preclinical
Structure Type MOL
InChI Key VEGXETMJINRLTH-HKHRZCBZSA-N
1
Targets
1
Activities
1
Assay Types
0
PK Parameters
1
Publications
0
Known Names

Molecular Properties

449.6
MW (Da)
-3.98
ALogP
12
HBA
8
HBD
213.7
PSA (Ų)
0.19
QED
2
Ro5 Violations
6
Rot. Bonds

Drug Information

Molecule Type Small molecule
Availability Unknown
Chirality Unknown

Flags

Natural Product First in Class Prodrug

Extended Properties

Molecular Formula C19H39N5O7
MW 449.55
Aromatic Rings 0
Heavy Atoms 31
NP-Likeness 1.53

Activity Summary

Kd 1 meas. best 5.26

Target Activity Profile

Target Type Best pChEMBL Mean pChEMBL Best (nM) # Data
Ribosomal RNA A-site
CHEMBL614640
Kd 5.26 5.26 5530.0 1

Activity Data Samples

Top measurements by pChEMBL value

Target Type Rel. Value Units pChEMBL Assay PubMed
Ribosomal RNA A-site Kd = 5530.0 nM 5.26 Binding affinity to bacterial ribosomal A site RNA oligonucleotide 16942021

Literature References

PubMed DOI Target Context # Activities
16942021 10.1021/jm060288o Ribosomal RNA A-site 1

Data from ChEMBL 36 via Core Engine