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Assay Detail

CHEMBL3431448

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Functional
GSK_TCAKS: pIC50 Trypanosoma cruzi Imaging: Amastigotes/Cell. H9c2 cells were seeded in T-225 flasks (225cm^2 culture surface; Corning Inc., NY, USA) in DMEM-10% FBS for 4h to allow attachment. Cells were then washed once with PBS before infection. T. cruzi trypomastigotes, collected at days 5 to 8 after infection from LLC-MK2 parasite infected cultures, were allowed to swim out for 4h at 37C from a centrifuged pellet (2,500 rpm/10 min/room temperature). Trypomastigotes were then collected and counted in a CASY Cell Counter. Trypomastigotes, in supplemented DMEM, were added to H9c2 cultures in a multiplicity of infection of 1 and incubated for 18 h. Cells were washed once with PBS before incubation of the infected H9c2 monolayer with trypsin (Life-Technologies) to detach cells from the flask. Cells were counted in a CASY Cell Counter using a 150 um capillary and their density set at 5 * 10^4 cells per mL in supplemented assay DMEM. Infected H9c2 were dispensed into 384-well poly-lysine coated assay plates at 50uL per well using a Multidrop Combi dispenser. After seeding them, the plates were incubated at 37C, 5% CO2 for 72h. Cultures were then fixed and stained by addition of 50 uL of a solution containing 8% formaldehyde and 4 uM DRAQ5 DNA dye (BioStatus, UK) per well. Plates were kept light-protected and imaged one hour later in a Perkin-Elmer Opera microscope using a 20x air objective (NA 0.4) and the following acquisition set: a 635 nm laser excitation line and a 690/50 emission detection filter for DRAQ5 detection. Five images were collected per well for reliable statistical analysis. Automated image analysis was performed with a script developed on Acapella High Content Imaging and Analysis Software (PerkinElmer). Output: number of amastigotes per cell as infection level measurement.
580
Total Activities
580
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Functional
Organism Rattus norvegicus
Cell Type H9c2
Confidence 1 — Organism
Curated By Autocuration

Target

Trypanosoma cruzi (CHEMBL368)
Type ORGANISM
Organism Trypanosoma cruzi

Publication

GSK Tres Cantos Anti-Kinetoplastid Screening (TCAKS) Data.
Imanol Pena, M. Pilar Manzano, Juan Cantizani, Albane Kessler, Julio Alonso-Padilla, Ana I. Bardera, Emilio Alvarez, Gonzalo Colmenarejo, Ignacio Cotillo, Irene Roquero, Francisco de Dios-Anton, Vanessa Barroso, Ana Rodriguez, David W. Gray, Miguel Navarro, Vinod Kumar, Alexander Sherstnev, David Drewry, James R. Brown, Jose M. Fiandor & J. Julio Martin.

· DOI

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 580 6.02 9.00

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3431129 1 9.00
CHEMBL528583 1 8.30
CHEMBL3430980 1 8.30
CHEMBL3431117 1 8.00
CHEMBL3431128 1 8.00
CHEMBL3431418 1 7.90
CHEMBL3431261 1 7.80
CHEMBL3431193 1 7.70
CHEMBL3431434 1 7.70
CHEMBL3431211 1 7.70
CHEMBL3431025 1 7.70
CHEMBL3431206 1 7.50
CHEMBL1325144 1 7.50
CHEMBL3431435 1 7.50
CHEMBL3431131 1 7.40
CHEMBL3430992 1 7.40
CHEMBL3431266 1 7.40
CHEMBL3431155 1 7.40
CHEMBL3431140 1 7.40
CHEMBL3431033 1 7.40
CHEMBL3431070 1 7.30
CHEMBL2441267 1 7.30
CHEMBL3431358 1 7.30
CHEMBL3431361 1 7.30
CHEMBL3431400 1 7.30
CHEMBL3431130 1 7.20
CHEMBL1593679 1 7.20
CHEMBL3431318 1 7.20
CHEMBL3431326 1 7.20
CHEMBL3431337 1 7.20

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3431129 IC50 = 1.0 nM 9.00
CHEMBL528583 IC50 = 5.012 nM 8.30
CHEMBL3430980 IC50 = 5.012 nM 8.30
CHEMBL3431117 IC50 = 10.0 nM 8.00
CHEMBL3431128 IC50 = 10.0 nM 8.00
CHEMBL3431418 IC50 = 12.59 nM 7.90
CHEMBL3431261 IC50 = 15.85 nM 7.80
CHEMBL3431193 IC50 = 19.95 nM 7.70
CHEMBL3431025 IC50 = 19.95 nM 7.70
CHEMBL3431434 IC50 = 19.95 nM 7.70
CHEMBL3431211 IC50 = 19.95 nM 7.70
CHEMBL1325144 IC50 = 31.62 nM 7.50
CHEMBL3431206 IC50 = 31.62 nM 7.50
CHEMBL3431435 IC50 = 31.62 nM 7.50
CHEMBL3431266 IC50 = 39.81 nM 7.40
CHEMBL3430992 IC50 = 39.81 nM 7.40
CHEMBL3431140 IC50 = 39.81 nM 7.40
CHEMBL3431033 IC50 = 39.81 nM 7.40
CHEMBL3431131 IC50 = 39.81 nM 7.40
CHEMBL3431155 IC50 = 39.81 nM 7.40
CHEMBL3431361 IC50 = 50.12 nM 7.30
CHEMBL3431358 IC50 = 50.12 nM 7.30
CHEMBL3431070 IC50 = 50.12 nM 7.30
CHEMBL2441267 IC50 = 50.12 nM 7.30
CHEMBL3431400 IC50 = 50.12 nM 7.30
CHEMBL3431326 IC50 = 63.1 nM 7.20
CHEMBL3430925 IC50 = 63.1 nM 7.20
CHEMBL3431318 IC50 = 63.1 nM 7.20
CHEMBL3431415 IC50 = 63.1 nM 7.20
CHEMBL1593679 IC50 = 63.1 nM 7.20
CHEMBL3431352 IC50 = 63.1 nM 7.20
CHEMBL3431337 IC50 = 63.1 nM 7.20
CHEMBL3431130 IC50 = 63.1 nM 7.20
CHEMBL3431405 IC50 = 79.43 nM 7.10
CHEMBL3431412 IC50 = 79.43 nM 7.10
CHEMBL3430996 IC50 = 79.43 nM 7.10
CHEMBL3431151 IC50 = 79.43 nM 7.10
CHEMBL3431354 IC50 = 79.43 nM 7.10
CHEMBL3431220 IC50 = 79.43 nM 7.10
CHEMBL3430926 IC50 = 79.43 nM 7.10
CHEMBL3431355 IC50 = 79.43 nM 7.10
CHEMBL3430915 IC50 = 79.43 nM 7.10
CHEMBL1458931 IC50 = 79.43 nM 7.10
CHEMBL3431056 IC50 = 79.43 nM 7.10
CHEMBL3431003 IC50 = 79.43 nM 7.10
CHEMBL3431192 IC50 = 79.43 nM 7.10
CHEMBL3431241 IC50 = 100.0 nM 7.00
CHEMBL3431263 IC50 = 100.0 nM 7.00
CHEMBL3431133 IC50 = 100.0 nM 7.00
CHEMBL3431257 IC50 = 100.0 nM 7.00