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Assay Detail

CHEMBL3888751

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Binding
Fluorescence Polarization Competition Immunoassay: An autophosphorylation, fluorescence polarization competition immunoassay was used to determine the potency for c-fms inhibition exhibited by selected compounds of Formula I. The assay was performed in black 96-well microplates (LJL BioSystems). The assay buffer used was 100 mM 4-(2-hydroxyethyl)piperazine 1-ethanesulfonic acid (HEPES), pH 7.5, 1 mM 1,4-dithio-DL-threitol (DTT), 0.01% (v/v) Tween-20. Compounds were diluted in assay buffer containing 4% dimethylsulfoxide (DMSO) just prior to the assay. To each well, 5 μL of compound were added followed by the addition of 3 μL of a mix containing 33 nM c-fms (Johnson & Johnson PRD) and 16.7 mM MgCl2 (Sigma) in assay buffer. The kinase reaction was initiated by adding 2 μL of 5 mM ATP (Sigma) in assay buffer. The final concentrations in the assay were 10 nM c-fms, 1 mM ATP, 5 mM MgCl2, 2% DMSO. Control reactions were ran in each plate: in positive and negative control wells, assay buffer (made 4% in DMSO) was substituted for the compound; in addition, positive control wells received 1.2 μL of 50 mM ethylenediaminetetraaceticacid (EDTA). The plates were incubated at room temperature for 45 min. At the end of the incubation, the reaction was quenched with 1.2 μL of 50 mM EDTA (EDTA was not added to the positive control wells at this point; see above). Following a 5-min incubation, each well received 10 μL of a 1:1:3 mixture of anti-phosphotyrosine antibody, 10×, PTK green tracer, 10× (vortexed), FP dilution buffer, respectively (all from PanVera, cat. #P2837). The plate was covered, incubated for 30 min at room temperature and the fluorescence polarization was read on the Analyst. The instrument settings were: 485 nm excitation filter; 530 nm emission filter; Z height: middle of well; G factor: 0.93. Under these conditions, the fluorescence polarization values for positive and negative controls were approximately 300 and 150, respectively, and were used to define the 100% and 0% inhibition of the c-fms reaction.
44
Total Activities
44
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Mus musculus
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

Macrophage colony-stimulating factor 1 receptor (CHEMBL5570)
Type SINGLE PROTEIN
Organism Mus musculus

Publication

Inhibitors of c-fms kinase
(2016)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 44 8.62 9.38

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3929497 1 9.38
CHEMBL3958852 1 9.31
CHEMBL3965172 1 9.30
CHEMBL3897660 1 9.25
CHEMBL3897036 1 9.17
CHEMBL3925749 1 9.17
CHEMBL3913010 1 9.15
CHEMBL3933145 1 9.15
CHEMBL3920991 1 9.10
CHEMBL3889809 1 9.10
CHEMBL3891583 1 9.10
CHEMBL3966465 1 8.96
CHEMBL3985982 1 8.96
CHEMBL3937612 1 8.85
CHEMBL3981521 1 8.82
CHEMBL3981992 1 8.80
CHEMBL3950848 1 8.80
CHEMBL3894073 1 8.80
CHEMBL3901538 1 8.77
CHEMBL3912053 1 8.74
CHEMBL3903144 1 8.74
CHEMBL3929378 1 8.74
CHEMBL3905986 1 8.72
CHEMBL3958536 1 8.66
CHEMBL3974798 1 8.62
CHEMBL3986237 1 8.54
CHEMBL3973846 1 8.54
CHEMBL3910826 1 8.54
CHEMBL3927528 1 8.54
CHEMBL3970630 1 8.52

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3929497 IC50 = 0.42 nM 9.38
CHEMBL3958852 IC50 = 0.49 nM 9.31
CHEMBL3965172 IC50 = 0.5 nM 9.30
CHEMBL3897660 IC50 = 0.56 nM 9.25
CHEMBL3897036 IC50 = 0.67 nM 9.17
CHEMBL3925749 IC50 = 0.67 nM 9.17
CHEMBL3913010 IC50 = 0.7 nM 9.15
CHEMBL3933145 IC50 = 0.7 nM 9.15
CHEMBL3920991 IC50 = 0.8 nM 9.10
CHEMBL3891583 IC50 = 0.8 nM 9.10
CHEMBL3889809 IC50 = 0.8 nM 9.10
CHEMBL3985982 IC50 = 1.1 nM 8.96
CHEMBL3966465 IC50 = 1.1 nM 8.96
CHEMBL3937612 IC50 = 1.4 nM 8.85
CHEMBL3981521 IC50 = 1.5 nM 8.82
CHEMBL3981992 IC50 = 1.6 nM 8.80
CHEMBL3894073 IC50 = 1.6 nM 8.80
CHEMBL3950848 IC50 = 1.6 nM 8.80
CHEMBL3901538 IC50 = 1.7 nM 8.77
CHEMBL3912053 IC50 = 1.8 nM 8.74
CHEMBL3903144 IC50 = 1.8 nM 8.74
CHEMBL3929378 IC50 = 1.8 nM 8.74
CHEMBL3905986 IC50 = 1.9 nM 8.72
CHEMBL3958536 IC50 = 2.2 nM 8.66
CHEMBL3974798 IC50 = 2.4 nM 8.62
CHEMBL3986237 IC50 = 2.9 nM 8.54
CHEMBL3973846 IC50 = 2.9 nM 8.54
CHEMBL3910826 IC50 = 2.9 nM 8.54
CHEMBL3927528 IC50 = 2.9 nM 8.54
CHEMBL3970630 IC50 = 3.0 nM 8.52
CHEMBL3961857 IC50 = 3.2 nM 8.49
CHEMBL3987062 IC50 = 3.2 nM 8.49
CHEMBL3906534 IC50 = 3.6 nM 8.44
CHEMBL3949723 IC50 = 3.7 nM 8.43
CHEMBL3958366 IC50 = 3.9 nM 8.41
CHEMBL3979814 IC50 = 4.0 nM 8.40
CHEMBL3896478 IC50 = 6.4 nM 8.19
CHEMBL3966302 IC50 = 6.5 nM 8.19
CHEMBL3980890 IC50 = 7.9 nM 8.10
CHEMBL3963005 IC50 = 8.4 nM 8.08
CHEMBL3953673 IC50 = 13.0 nM 7.89
CHEMBL3922115 IC50 = 26.0 nM 7.58
CHEMBL4112693 IC50 = 82.0 nM 7.09
CHEMBL3936501 IC50 = 210.0 nM 6.68