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Assay Detail

CHEMBL5732173

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Binding
Determining Endocannabinoid Hydrolase Activity: In the Experimental example, endocannabinoid hydrolases used were Fatty Acid Amide Hydrolase (FAAH) and N-acylethanolamide hydrolyzing acid amidase (NAAA), which were prepared by the method described in the document (PMCID: PMC3423427, PMC3723234, PMC2692831, PMC3382457). The preparation method was as followed: a plasmid (pCDNA3.1/NAAA or pCDNA3.1/FAAH) carrying a whole NAAA/FAAH gene was constructed, wherein the plasmid carried Cytomegalovirus (CMV) promoter and Neomycin selectable gene; the plasmid was transformed into HEK-293 cell via lipid medium, stable cell lines expressing NAAA/FAAH at a high level were obtained by G418 screening and Western-blot method. HEK-293 recombinant cells were cultured and collected, washed with PBS for 2-3 times, and ultrasonically treated in 20 mM Tris-HCl containing 0.32 M sucrose, then repeatedly frozen and thawed twice, and then centrifuged at 4° C., 800 g for 15 min. The supernatant (i.e., the desired protein) was collected, the protein concentration was determined by BCA method, and the protein was diluted to a concentration of 1 mg/mL, and sub-packaged and stored in a refrigerator at −80° C. for further use.In the Experimental example, PBS solution used was prepared as followed: 8 g NaCl, 0.2 g KCl, 1.44 g Na2HPO4, and 0.24 g KH2PO4 were dissolved in 1 L ultrapure water, and the resultant solution was subjected to moist heat sterilization and stored at 4° C.30 μL (1 mg/mL) endocannabinoid hydrolase was added to a sample vial, and 2 μL DMSO (Blank control group) or a different concentration of a test compound (Compounds 1-46 prepared in the Examples according to the invention) was further added. The reaction was carried out at 37° C. for 10 min. 170 μL buffer (the buffer consisted of 50 mM disodium Hydrogen Phosphate, 0.1% Triton X-100, 3 mM DTT, 150 μL) containing enzymatic hydrolysis substrate (the substrate was a heptadecenoyl ethanolamine containing a double bond and 17 carbon atoms, abbreviated as 17:1 FAE) was further added, wherein the concentration of 17:1 FAE was 5 μM. The reaction was carried out at 37° C. for 30 min, and 200 μL methanol solution containing internal standard (the internal standard was margaric acid, at a concentration of 1 nmol) was then added to stop the reaction. LC-MS was used to determine the yield of the hydrolysate 17:1 FA (i.e., a heptadecenoic acid containing a double bond) of 17:1 FAE, then a graph was plotted with Graphpad Prism 5. Thereby, the IC50 of the test compound on endocannabinoid hydrolase was determined.By the method above, the inhibitory effects of the Compounds 1-46 prepared in the invention on NAAA and FAAH were determined. The results were shown in Table 1, wherein IC50 (NAAA) represents a concentration that inhibits NAAA activity to 50% of the activity prior to inhibition, IC50 (FAAH) represents a concentration that inhibits FAAH activity to 50% of the activity prior to inhibition, and >100 μM represents that IC50 of a compound on a corresponding enzyme is above 100 μM, indicating that the compound has no inhibitory effect on the enzyme.
138
Total Activities
46
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

N-acylethanolamine-hydrolyzing acid amidase (CHEMBL4349)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Substituted heterocyclic derivative, preparation method and use thereof
(2019)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 46 5.77 7.75
kon 46 - -
k_off 46 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL4215669 3 7.75
CHEMBL5893574 3 7.57
CHEMBL4211433 3 7.05
CHEMBL5851728 3 6.89
CHEMBL5794858 3 6.75
CHEMBL4203151 3 6.68
CHEMBL5782422 3 6.60
CHEMBL5746681 3 6.47
CHEMBL4218797 3 6.46
CHEMBL5973828 3 6.44
CHEMBL4210713 3 6.43
CHEMBL5860853 3 6.43
CHEMBL5947146 3 6.42
CHEMBL4205072 3 6.36
CHEMBL5859701 3 6.35
CHEMBL4205848 3 6.17
CHEMBL5744150 3 6.07
CHEMBL5999057 3 6.04
CHEMBL5851864 3 6.04
CHEMBL5760013 3 5.66
CHEMBL5806471 3 5.47
CHEMBL4214351 3 5.29
CHEMBL5905351 3 5.27
CHEMBL5911657 3 5.24
CHEMBL6041265 3 5.03
CHEMBL5835458 3 5.02
CHEMBL5916300 3 4.95
CHEMBL5749886 3 4.80
CHEMBL5839808 3 4.68
CHEMBL5830549 3 4.63

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL4215669 IC50 = 18.0 nM 7.75
CHEMBL5893574 IC50 = 27.0 nM 7.57
CHEMBL4211433 IC50 = 90.0 nM 7.05
CHEMBL5851728 IC50 = 130.0 nM 6.89
CHEMBL5794858 IC50 = 180.0 nM 6.75
CHEMBL4203151 IC50 = 210.0 nM 6.68
CHEMBL5782422 IC50 = 250.0 nM 6.60
CHEMBL5746681 IC50 = 340.0 nM 6.47
CHEMBL4218797 IC50 = 350.0 nM 6.46
CHEMBL5973828 IC50 = 360.0 nM 6.44
CHEMBL4210713 IC50 = 370.0 nM 6.43
CHEMBL5860853 IC50 = 370.0 nM 6.43
CHEMBL5947146 IC50 = 380.0 nM 6.42
CHEMBL4205072 IC50 = 440.0 nM 6.36
CHEMBL5859701 IC50 = 450.0 nM 6.35
CHEMBL4205848 IC50 = 680.0 nM 6.17
CHEMBL5744150 IC50 = 850.0 nM 6.07
CHEMBL5851864 IC50 = 910.0 nM 6.04
CHEMBL5999057 IC50 = 920.0 nM 6.04
CHEMBL5760013 IC50 = 2200.0 nM 5.66
CHEMBL5806471 IC50 = 3400.0 nM 5.47
CHEMBL4214351 IC50 = 5100.0 nM 5.29
CHEMBL5905351 IC50 = 5400.0 nM 5.27
CHEMBL5911657 IC50 = 5700.0 nM 5.24
CHEMBL6041265 IC50 = 9400.0 nM 5.03
CHEMBL5835458 IC50 = 9500.0 nM 5.02
CHEMBL5916300 IC50 = 11200.0 nM 4.95
CHEMBL5749886 IC50 = 15800.0 nM 4.80
CHEMBL5839808 IC50 = 21000.0 nM 4.68
CHEMBL5830549 IC50 = 23500.0 nM 4.63
CHEMBL5945389 IC50 = 46800.0 nM 4.33
CHEMBL5753343 IC50 = 55000.0 nM 4.26
CHEMBL5895798 IC50 = 65300.0 nM 4.18
CHEMBL5804189 IC50 = 78600.0 nM 4.11
CHEMBL6035752 IC50 = 79200.0 nM 4.10
CHEMBL5974238 k_off = - s-1 -
CHEMBL5974238 IC50 > 100000.0 nM -
CHEMBL5974238 kon = - -
CHEMBL5851864 k_off = - s-1 -
CHEMBL5932272 kon = - -
CHEMBL5932272 k_off = - s-1 -
CHEMBL5999057 k_off = - s-1 -
CHEMBL4211433 kon = - -
CHEMBL4211433 k_off = - s-1 -
CHEMBL5999057 kon = - -
CHEMBL4218797 kon = - -
CHEMBL5749886 k_off = - s-1 -
CHEMBL4218797 k_off = - s-1 -
CHEMBL5749886 kon = - -
CHEMBL5932272 IC50 > 100000.0 nM -