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Assay Detail

CHEMBL5733768

Review assay metadata, readout intent, target linkage, and publication context from the same page.

Binding
Uptake Assay Protocol: SERT: This protocol was designed to measure inhibition of uptake by the human serotonin transporter. The reagents were human SERT (HEK293F) cells, fluoxetine (Sigma), nomifensine, neurotransmitter transporter uptake assay kit (Molecular Devices), freestyle 293 expression medium (Invitrogen), 10× Hank's Balanced Salt Solution (HBSS; Invitrogen), 1 M HEPES (Mediatech), Biocoat poly-D-lysine 96-well, black, clear plates (Becton, Dickinson), and 500 μL polypropylene U-bottom 96-well plates (Fisher). The Assay Buffer (AB) was 1λ HBSS and 0.02 M HEPES.The HEK293F cells were transfected with the human serotonin transporter and frozen in 1 mL aliquots at about 1E+07 cells/mL. On the day of the experiment, the cells were removed from −80° C. or liquid nitrogen and thawed in a room temperature water bath. The cells were dilute to about 1-2E+06 with Freestyle medium. A 1 mL sample (1:2 dilution) was prepared, and the cells were counted. The cells were spun at 1100 rpm for 5 minutes, and the medium was aspirated off. The cells were resuspend in medium at 1.5E+06 cells/mL for about 60,000 cells per well. 40 μL of cells were dispensed per well in the Biocoat plates. The plates were spun at 1100 rpm for 1 minute to improve homogeneity of the cell layer and were incubated at 37° C. for a minimum of 3 hours.
540
Total Activities
167
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Sodium-dependent serotonin transporter (CHEMBL228)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Inhibiting neurotransmitter reuptake
(2018)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
Ki 180 7.57 9.52
kon 180 - -
k_off 180 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL6004053 3 9.52
CHEMBL5981380 3 9.40
CHEMBL5759494 3 9.22
CHEMBL5747720 3 9.15
CHEMBL5925642 3 9.15
CHEMBL5851134 3 9.10
CHEMBL490 PAROXETINE 4.0 3 9.10
CHEMBL5994278 3 9.05
CHEMBL6024071 3 9.00
CHEMBL5924087 3 8.96
CHEMBL5828171 3 8.96
CHEMBL4227444 3 8.92
CHEMBL5825194 3 8.89
CHEMBL5983313 3 8.85
CHEMBL5925065 3 8.80
CHEMBL5897284 3 8.74
CHEMBL5992117 3 8.74
CHEMBL5886852 3 8.72
CHEMBL5879985 3 8.72
CHEMBL6065442 3 8.68
CHEMBL5861141 3 8.68
CHEMBL5769402 6 8.66
CHEMBL6005366 3 8.66
CHEMBL5798072 6 8.64
CHEMBL6033654 3 8.62
CHEMBL5901363 3 8.62
CHEMBL5948538 3 8.62
CHEMBL6048972 6 8.60
CHEMBL5885108 3 8.60
CHEMBL5953823 3 8.59

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL6004053 Ki = 0.3 nM 9.52
CHEMBL5981380 Ki = 0.4 nM 9.40
CHEMBL5759494 Ki = 0.6 nM 9.22
CHEMBL5925642 Ki = 0.7 nM 9.15
CHEMBL5747720 Ki = 0.7 nM 9.15
CHEMBL490 PAROXETINE Ki = 0.8 nM 9.10
CHEMBL5851134 Ki = 0.8 nM 9.10
CHEMBL5994278 Ki = 0.9 nM 9.05
CHEMBL6024071 Ki = 1.0 nM 9.00
CHEMBL5828171 Ki = 1.1 nM 8.96
CHEMBL5924087 Ki = 1.1 nM 8.96
CHEMBL4227444 Ki = 1.2 nM 8.92
CHEMBL5825194 Ki = 1.3 nM 8.89
CHEMBL5983313 Ki = 1.4 nM 8.85
CHEMBL5925065 Ki = 1.6 nM 8.80
CHEMBL5992117 Ki = 1.8 nM 8.74
CHEMBL5897284 Ki = 1.8 nM 8.74
CHEMBL5886852 Ki = 1.9 nM 8.72
CHEMBL5879985 Ki = 1.9 nM 8.72
CHEMBL5861141 Ki = 2.1 nM 8.68
CHEMBL6065442 Ki = 2.1 nM 8.68
CHEMBL5769402 Ki = 2.2 nM 8.66
CHEMBL6005366 Ki = 2.2 nM 8.66
CHEMBL5798072 Ki = 2.3 nM 8.64
CHEMBL6033654 Ki = 2.4 nM 8.62
CHEMBL5901363 Ki = 2.4 nM 8.62
CHEMBL5948538 Ki = 2.4 nM 8.62
CHEMBL5885108 Ki = 2.5 nM 8.60
CHEMBL6048972 Ki = 2.5 nM 8.60
CHEMBL5953823 Ki = 2.6 nM 8.59
CHEMBL5969329 Ki = 2.7 nM 8.57
CHEMBL6049222 Ki = 2.7 nM 8.57
CHEMBL5919524 Ki = 2.8 nM 8.55
CHEMBL6004223 Ki = 2.9 nM 8.54
CHEMBL5809105 Ki = 3.0 nM 8.52
CHEMBL5920601 Ki = 3.1 nM 8.51
CHEMBL5982233 Ki = 3.2 nM 8.49
CHEMBL5982093 Ki = 3.3 nM 8.48
CHEMBL5978682 Ki = 3.3 nM 8.48
CHEMBL5992805 Ki = 3.4 nM 8.47
CHEMBL5905823 Ki = 3.6 nM 8.44
CHEMBL5975800 Ki = 3.7 nM 8.43
CHEMBL1118 DESVENLAFAXINE Ki = 4.1 nM 8.39
CHEMBL6032995 Ki = 4.2 nM 8.38
CHEMBL5814744 Ki = 4.3 nM 8.37
CHEMBL5869405 Ki = 4.4 nM 8.36
CHEMBL1189841 Ki = 4.6 nM 8.34
CHEMBL5756427 Ki = 5.1 nM 8.29
CHEMBL5991104 Ki = 5.2 nM 8.28
CHEMBL5877774 Ki = 5.4 nM 8.27