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Assay Detail

CHEMBL5735003

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Binding
Competitive Radioligand Binding Assay: Radioligand binding assays for Sigma-1 receptors and Sigma-2 receptors were carried out by a commercial contract research organization. For Sigma-1 binding, various concentrations of test compounds from 100 μM to 1 nM were used to displace 8 nM [3H](+)pentazocine from endogenous receptors on Jurkat cell membranes (Ganapathy M E et al. 1991, J Pharmacol. Exp. Ther. 289:251-260). 10 μM Haloperidol was used to define non-specific binding. For Sigma-2 receptors various concentrations of test compounds from 100 μM to 1 nM were used to displace 5 nM [3H] 1,3-Di-(2-tolyl)guanidine from endogenous receptors on membranes from rat cerebral cortex in the presence of 300 nM (+)pentazocine to mask Sigma-1 receptors. (Bowen W D, et al. 1993, Mol. Neuropharmcol 3:117-126). 10 μM Haloperidol was used to define non-specific binding. Reactions were terminated by rapid filtration through Whatman GF/C filters using a Brandel 12R cell harvester followed by two washes with ice-cold buffer. Radioactivity on the dried filter discs was measured using a liquid scintillation analyzer (Tri-Carb 2900TR; PerkinElmer Life and Analytical Sciences). The displacement curves were plotted and the Ki values of the test ligands for the receptor subtypes were determined using GraphPad Prism (GraphPad Software Inc., San Diego, Calif.). The percentage specific binding was determined by dividing the difference between total bound (disintegrations per minute) and nonspecific bound (disintegrations per minute) by the total bound (disintegrations per minute).Affinities for Sigma-1 and Sigma-2 receptors are typically obtained from published studies using cerebral tissue homogenates with [3H](+)pentazocine to measure displacement from Sigma-1 receptors and [3H] 1,3-Di-(2-tolyl)guanidine in the presence of 300 nM (+)pentazocine to measure displacement from Sigma-2 receptors.
231
Total Activities
77
Compounds Tested
3
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Organism Homo sapiens
Confidence 9 — Direct single protein target
Curated By Autocuration

Target

Sigma non-opioid intracellular receptor 1 (CHEMBL287)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Isoindoline compositions and methods for treating neurodegenerative disease
(2020)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
Ki 77 6.84 9.24
kon 77 - -
k_off 77 - -

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL5979974 3 9.24
CHEMBL5990621 3 8.85
CHEMBL5975554 3 8.68
CHEMBL6002762 3 8.43
CHEMBL5823135 3 8.39
CHEMBL5818991 3 8.31
CHEMBL5902857 3 8.24
CHEMBL5928382 3 8.12
CHEMBL6030456 3 8.11
CHEMBL6057860 3 8.10
CHEMBL6051981 3 8.04
CHEMBL4853196 3 7.85
CHEMBL5879895 3 7.80
CHEMBL6056346 3 7.77
CHEMBL5859046 3 7.77
CHEMBL6010674 3 7.75
CHEMBL5887106 3 7.66
CHEMBL6042113 3 7.64
CHEMBL5759354 3 7.57
CHEMBL6030320 3 7.51
CHEMBL5946543 3 7.50
CHEMBL5777736 3 7.48
CHEMBL5811349 3 7.48
CHEMBL5871057 3 7.43
CHEMBL4876663 3 7.39
CHEMBL5995733 3 7.38
CHEMBL5982604 3 7.38
CHEMBL5946331 3 7.36
CHEMBL6016888 3 7.34
CHEMBL5934082 3 7.33

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL5979974 Ki = 0.57 nM 9.24
CHEMBL5990621 Ki = 1.4 nM 8.85
CHEMBL5975554 Ki = 2.1 nM 8.68
CHEMBL6002762 Ki = 3.7 nM 8.43
CHEMBL5823135 Ki = 4.1 nM 8.39
CHEMBL5818991 Ki = 4.9 nM 8.31
CHEMBL5902857 Ki = 5.7 nM 8.24
CHEMBL5928382 Ki = 7.5 nM 8.12
CHEMBL6030456 Ki = 7.8 nM 8.11
CHEMBL6057860 Ki = 7.9 nM 8.10
CHEMBL6051981 Ki = 9.1 nM 8.04
CHEMBL4853196 Ki = 14.0 nM 7.85
CHEMBL5879895 Ki = 16.0 nM 7.80
CHEMBL5859046 Ki = 17.0 nM 7.77
CHEMBL6056346 Ki = 17.0 nM 7.77
CHEMBL6010674 Ki = 18.0 nM 7.75
CHEMBL5887106 Ki = 22.0 nM 7.66
CHEMBL6042113 Ki = 23.0 nM 7.64
CHEMBL5759354 Ki = 27.0 nM 7.57
CHEMBL6030320 Ki = 31.0 nM 7.51
CHEMBL5946543 Ki = 32.0 nM 7.50
CHEMBL5811349 Ki = 33.0 nM 7.48
CHEMBL5777736 Ki = 33.0 nM 7.48
CHEMBL5871057 Ki = 37.0 nM 7.43
CHEMBL4876663 Ki = 41.0 nM 7.39
CHEMBL5995733 Ki = 42.0 nM 7.38
CHEMBL5982604 Ki = 42.0 nM 7.38
CHEMBL5946331 Ki = 44.0 nM 7.36
CHEMBL6016888 Ki = 46.0 nM 7.34
CHEMBL5934082 Ki = 47.0 nM 7.33
CHEMBL5931677 Ki = 50.0 nM 7.30
CHEMBL5770059 Ki = 55.0 nM 7.26
CHEMBL5815237 Ki = 56.0 nM 7.25
CHEMBL5861338 Ki = 62.0 nM 7.21
CHEMBL4846092 Ki = 63.0 nM 7.20
CHEMBL6040331 Ki = 69.0 nM 7.16
CHEMBL5945487 Ki = 69.0 nM 7.16
CHEMBL5793914 Ki = 74.0 nM 7.13
CHEMBL5783755 Ki = 77.0 nM 7.11
CHEMBL6022823 Ki = 94.0 nM 7.03
CHEMBL5960929 Ki = 96.0 nM 7.02
CHEMBL6059566 Ki = 100.0 nM 7.00
CHEMBL5841969 Ki = 100.0 nM 7.00
CHEMBL5866374 Ki = 110.0 nM 6.96
CHEMBL4867297 Ki = 120.0 nM 6.92
CHEMBL5899919 Ki = 130.0 nM 6.89
CHEMBL5894654 Ki = 130.0 nM 6.89
CHEMBL6026313 Ki = 180.0 nM 6.75
CHEMBL5844716 Ki = 220.0 nM 6.66
CHEMBL5872171 Ki = 240.0 nM 6.62