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Compound Detail

CHEMBL1213459

DEPUDECIN
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C=C[C@@H](O)[C@@H]1O[C@H]1/C=C/[C@@H]1O[C@@H]1[C@@H](C)O

Basic Information

ChEMBL ID CHEMBL1213459
Name DEPUDECIN
Phase Preclinical
Structure Type MOL
InChI Key DLVJMFOLJOOWFS-VJIFSZOSSA-N
3
Targets
3
Activities
1
Assay Types
0
PK Parameters
3
Publications
0
Known Names

Molecular Properties

212.2
MW (Da)
0.01
ALogP
4
HBA
2
HBD
65.5
PSA (Ų)
0.50
QED
0
Ro5 Violations
5
Rot. Bonds

Drug Information

Molecule Type Small molecule
Availability Unknown
Chirality Unknown

Flags

Natural Product First in Class Prodrug

Extended Properties

Molecular Formula C11H16O4
MW 212.25
Aromatic Rings 0
Heavy Atoms 15
NP-Likeness 1.77

Activity Summary

Ki 3 meas. best 5.26

Target Activity Profile

Target Type Best pChEMBL Mean pChEMBL Best (nM) # Data
Histone deacetylase 1
CHEMBL325
Ki 5.26 5.26 5500.0 1
Histone deacetylase 2
CHEMBL1937
Ki 4.9 4.9 12500.0 1
Histone deacetylase 3
CHEMBL1829
Ki 4.84 4.84 14500.0 1

Activity Data Samples

Top measurements by pChEMBL value

Target Type Rel. Value Units pChEMBL Assay PubMed
Histone deacetylase 1 Ki = 5500.0 nM 5.26 Inhibition of human HDAC1 20139990
Histone deacetylase 2 Ki = 12500.0 nM 4.9 Inhibition of human HDAC2 20139990
Histone deacetylase 3 Ki = 14500.0 nM 4.84 Inhibition of human HDAC3 20139990

Literature References

PubMed DOI Target Context # Activities
20139990 10.1038/nchembio.313 Histone deacetylase 1 1
20139990 10.1038/nchembio.313 Histone deacetylase 2 1
20139990 10.1038/nchembio.313 Histone deacetylase 3 1

Data from ChEMBL 36 via Core Engine