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Assay Detail

CHEMBL3889252

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Binding
Homogeneous Time Resolved-fluorescence Resonance Energy Transfer (TR-FRET) Assay: LRRK2 kinase activity is measured using a LanthaScreen kinase activity assay available from Invitrogen (Life Technologies Corporation). The assay is a homogeneous time resolved-fluorescence resonance energy transfer (TR-FRET) assay that measures phosphorylation of a fluorescein-labelled peptide substrate (fluorescein-LRRKtide, fluorescein-GAGRLGRDKYKTLRQIRQ) (SEQ ID NO 1) as a result of LRRK2 kinase activity. The phosphorylated peptide is recognized by a terbium-labelled phospho-specific anti-LRRKtide antibody and, subsequently, the phosphorylated LRRKtide can be quantified by the extent of TR-FRET between the terbium donor and fluorescein acceptor.The LRRK2 kinase is obtained from Invitrogen (Life Technologies Corporation) and comprises residues 970 to 2527 of the full length human wild-type LRRK2 kinase or a similar sequence with the G2019S mutation. As discussed above, this mutation increases the kinase activity relative to the wild-type. The kinase reactions are performed in a 20 uL volume in 384-well plates. The kinase reaction buffer consists of 50 mM Tris pH 8.5, 0.01% BRIJ-35, 10 mM MgCl2, 1 mM EGTA, and 2 mM DTT.  In the assay, 1 nM LRRK2 WT or 250 pM LRRK2 G2019S kinase is incubated with the test compound (typically at 0 to 30 uM) for 30 minutes before the kinase reaction is initiated by addition of 1.3 mM ATP and 0.4 uM fluorescein-LRRKtide. The reaction mixture (20 ul total volume) is incubated for 2 hours at 30° C. before the reaction is terminated by addition of 10 mM EDTA and 1 nM terbium-labelled anti-phospho-LRRKtide antibody (final volume 20 ul). The mixture is further incubated for 30 minutes at RT. TR-FRET is measured by excitation of the terbium-donor with 340 nm light and subsequent (delay time 100 us) measurement of terbium and fluorescein emission at 495 nm and 520 nm, respectively, over a time window of 1000 us. The measurement is repeated 10 times for fluorescein and 10 times for terbium emission with a 2000 us time window between repeats. TR-FRET measurements are performed on a Biomek Synergy plate. The TR-FRET signal is calculated as the emission-ratio at 520 nm over 495 nm.
23
Total Activities
23
Compounds Tested
1
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Publication

Arylpyrrolopyridine derived compounds as LRRK2 inhibitors
(2016)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
IC50 23 6.93 9.00

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL3980700 1 9.00
CHEMBL3969077 1 8.70
CHEMBL3961632 1 7.77
CHEMBL3967289 1 7.58
CHEMBL3933899 1 7.43
CHEMBL3961481 1 7.30
CHEMBL3939513 1 7.24
CHEMBL3975772 1 7.11
CHEMBL3919862 1 6.97
CHEMBL3937634 1 6.81
CHEMBL3907032 1 6.79
CHEMBL3912951 1 6.71
CHEMBL3979676 1 6.70
CHEMBL3930527 1 6.67
CHEMBL3896115 1 6.62
CHEMBL3959637 1 6.60
CHEMBL3949880 1 6.54
CHEMBL3939512 1 6.29
CHEMBL3925092 1 6.28
CHEMBL3905887 1 6.24
CHEMBL3923178 1 6.19
CHEMBL3928607 1 6.07
CHEMBL3950909 1 5.88

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL3980700 IC50 = 1.0 nM 9.00
CHEMBL3969077 IC50 = 2.0 nM 8.70
CHEMBL3961632 IC50 = 17.0 nM 7.77
CHEMBL3967289 IC50 = 26.0 nM 7.58
CHEMBL3933899 IC50 = 37.0 nM 7.43
CHEMBL3961481 IC50 = 50.0 nM 7.30
CHEMBL3939513 IC50 = 58.0 nM 7.24
CHEMBL3975772 IC50 = 78.0 nM 7.11
CHEMBL3919862 IC50 = 108.0 nM 6.97
CHEMBL3937634 IC50 = 154.0 nM 6.81
CHEMBL3907032 IC50 = 164.0 nM 6.79
CHEMBL3912951 IC50 = 195.0 nM 6.71
CHEMBL3979676 IC50 = 201.0 nM 6.70
CHEMBL3930527 IC50 = 215.0 nM 6.67
CHEMBL3896115 IC50 = 240.0 nM 6.62
CHEMBL3959637 IC50 = 252.0 nM 6.60
CHEMBL3949880 IC50 = 288.0 nM 6.54
CHEMBL3939512 IC50 = 509.0 nM 6.29
CHEMBL3925092 IC50 = 527.0 nM 6.28
CHEMBL3905887 IC50 = 575.0 nM 6.24
CHEMBL3923178 IC50 = 650.0 nM 6.19
CHEMBL3928607 IC50 = 851.0 nM 6.07
CHEMBL3950909 IC50 = 1308.0 nM 5.88